Query= MSMg01no429_b09.b1 MSMg01no429_b09.b1 CHROMAT_FILE:
MSMg01no429_b09.b1 PHD_FILE: MSMg01no429_b09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:27 2005
(514 letters)
>mm_chr9_15061643_15062556
Length = 914
Score = 934 bits (483), Expect = 0.0
Identities = 495/499 (99%), Gaps = 1/499 (0%)
Strand = Plus / Minus
Query: 17 cacgtctgtaatccttatgcgcagggtgtagatggaaacaggcagatt-cggggattatc 75
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 906 cacgtctgtaatccttatgcgcagggtgtagatggaaacaggcagattccgggaattatc 847
Query: 76 agccagccagtctagccaattcgagatctcctagtcagagaaaattatttgcttcaaaaa 135
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 846 agccagccagtctagccaattcgtgatctcctagtcagagaaaattatttgcttcaaaaa 787
Query: 136 tcaggagtggagtgtgcttgaggaagacacctaatattgacctccgacttacacacacac 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 tcaggagtggagtgtgcttgaggaagacacctaatattgacctccgacttacacacacac 727
Query: 196 acatgcatacacccacatactcaagaggttgaaaatctgtcacccagtggtttttcttag 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 acatgcatacacccacatactcaagaggttgaaaatctgtcacccagtggtttttcttag 667
Query: 256 tgtgaatgaggtaactggagccacctctggcctccaacgcatgaagggattaccacccgg 315
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tgtgaatgaggtaacaggagccacctctggcctccaacgcatgaagggattaccacccgg 607
Query: 316 cccaaagcattacctttgagtttgtacctcctcttcctttggaatttatacgcacactga 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 cccaaagcattacctttgagtttgtacctcctcttcctttggaatttatacgcacactga 547
Query: 376 ttgcaaacccacatgaggctgattagcaccacagccacggcagcaagcagagcaaagaag 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ttgcaaacccacatgaggctgattagcaccacagccacggcagcaagcagagcaaagaag 487
Query: 436 acagcaacgaagtggaggtcttcatagcggatctctgcggtgggacaggaggggaggcaa 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 acagcaacgaagtggaggtcttcatagcggatctctgcggtgggacaggaggggaggcaa 427
Query: 496 ggtctctcttaataccaca 514
|||||||||||||||||||
Sbjct: 426 ggtctctcttaataccaca 408
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_b09.g1 MSMg01no429_b09.g1 CHROMAT_FILE:
MSMg01no429_b09.g1 PHD_FILE: MSMg01no429_b09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:27 2005
(244 letters)
>mm_chr9_14883404_14884047
Length = 644
Score = 447 bits (231), Expect = e-130
Identities = 240/243 (98%)
Strand = Plus / Plus
Query: 1 caggtccaagtagggtctctgtttgttctcagtactggggatcatgggagttagccacct 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 caggtccaagtagggtctctgtttgtcctcagtactggggatcatgggagttagccacct 260
Query: 61 ggttattgagggttactgtaaccttggactttagggacttcctaaagtagggaaggattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggttattgagggttactgtaaccttggactttagggacttcctaaagtagggaaggattt 320
Query: 121 gggagcccatttatgcattcttttatgttgttttaaagggtagtaaacaaatattgtgct 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggagcccatttatgcattattttatgttgttttaaagggtagtaaacaaatattgtgct 380
Query: 181 tagaactgaaatgggaggccttatagcctcacatgcatacattgaaatgttacagtatat 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagaactgaaatgggaggcctcatagcctcacatgcatacattgaaatgttacagtatat 440
Query: 241 tag 243
|||
Sbjct: 441 tag 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
