Query= MSMg01no431_h18.b1 MSMg01no431_h18.b1 CHROMAT_FILE:
MSMg01no431_h18.b1 PHD_FILE: MSMg01no431_h18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:48 2005
(209 letters)
>mm_chr9_111582500_111583109
Length = 610
Score = 342 bits (177), Expect = 7e-99
Identities = 197/205 (96%), Gaps = 4/205 (1%)
Strand = Plus / Plus
Query: 6 gaattctcataacattac-caacacagaacatttatggtatcttgtcaatgaaacatgct 64
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctcataacatgacacaacacagaacatttatggtatcttgtcaatgaaacatgct 265
Query: 65 agccacaaaaagatcaatgttacatgagatctgtagaacccacgatggctggatttattt 124
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 266 agccacaaaaagatcaatgttacatgagatctgtagaacccacaatggctggatttattt 325
Query: 125 ttatttttattttatttatttttttggatttatttttaaaagtgagtagagttatagtat 184
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 326 ttatttttattttattt---tttttggatttattttttaaagtgagtagagttatagtat 382
Query: 185 tcatctggaacgtatagggaggcag 209
|||||||||||||| ||||||||||
Sbjct: 383 tcatctggaacgtagagggaggcag 407
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 209
Length of database: 610
Length adjustment: 9
Effective length of query: 200
Effective length of database: 601
Effective search space: 120200
Effective search space used: 120200
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no431_h18.g1 MSMg01no431_h18.g1 CHROMAT_FILE:
MSMg01no431_h18.g1 PHD_FILE: MSMg01no431_h18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:49 2005
(444 letters)
>mm_chr9_111756390_111757233
Length = 844
Score = 588 bits (304), Expect = e-172
Identities = 355/372 (95%)
Strand = Plus / Minus
Query: 73 aagaaaaattaaggttgggtgtcaatctcagatctccatatacctgccactcacatttgc 132
|||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 789 aagagaaattaaggttgggtgtcagtctcagatctccatatacttgccactcacatttgc 730
Query: 133 attcacacatgagccctcacacatgtaaacacacatacaagtggacactgcacacacaga 192
||||||||||||||| ||||||| |||||||||||||||| |||||| || |||||||
Sbjct: 729 tttcacacatgagcccccacacatctaaacacacatacaagacgacactacatacacaga 670
Query: 193 cacatgcaaagaaacaaacacaaactgtcaatgagtatcactaagggacgtgtcagcctg 252
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 669 cacatgcaaagaaacaaacaaaaactgtcaatgagtatcactaaggggcgtgtcagcctg 610
Query: 253 gagggctgggaagataagtgggttcaggttgaactccaagagaaggatatgggcaccatc 312
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 609 gagggctgggaagataagtgggttcaggttgaactccaagagaaggatatgagcaccatc 550
Query: 313 ccttctgagtggaatagcatagaaagcccatgtgatgctggagatcagagtgagctctga 372
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 549 ccttctgagtggagtagcatagaaagcctatgtgatgctggagatcagagtgagctctga 490
Query: 373 acaatgaggatgggagaaatgtatacactaccacaaagaaccaaaagtcaaaacaagata 432
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 489 acaatgaggatgggagaaatgtatacactaccacaaagaaccaaaggccaaaacaagata 430
Query: 433 ggtttcagaagt 444
||||||||||||
Sbjct: 429 ggtttcagaagt 418
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
