CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAAGATTTATAAAATGTTCTTCTTGGTCTTAATCAGTGTTTCATTC
ATTGTTCTAAAGTAGGTTGTTTCATGTTAGTTAGTGTCTTTTCTGAATTT
CTCTGGCTTTTGGCTTTAAGCATTATTCCCAGTTGGTCAGATTGGATATG
TGTATCTATTTCAATTTTCTTAAAAATTTTAAGATTGCATTTGTGTGGTA
ATATAAGATATATTTTAGAAAAAAAATCCACAGACTGTTGAGAACAATGT
GTATGGTATGTTGCAGTTTTGGGAATGCAATATTCTGTAACTATTTGTTA
GGTCCATTTGGTCTATGATGTAATTTATCTTTGTTTTTGTTTCCTCTTTG
GATCACCTGTTCCCTGTGAAAGTGGGATACTGGAGTCATCTACTATTATC
AGGTTAGAAGTACTCAATGGCATAATATCTACTAGTGTTTGTTTTGTTTG
GTGCATGTTCCCACAATTTGGTGCATGTTCATTTATAAAATTTTTAAATT
AAATGTTTTCTTCCTTTATTTTCCAAAGTATCCCCTTTTCTAATTTCCTC
TCCCAAAAACCCTATACCCTCCCCTTGCCCCTGGTAGGCAACCCACCCCT
CCCTTTTTTGGGTCCTGGCTTCCCTAACACGGGGGTTTAACCCTTCCTAA
AACCAGGGCCCCCCCTTCTTTTTTTCTTTCTTCAAAGTACTTACTTTCCG
CTAGAGCCTTGGTTTCCCACTTCCA

CAATGATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXATTGATAACTAATAATACAGGCCATAA
AAGATGCTGTTTTAAGGTGTTCTTCTGAAAAACATTGCGAAGGAGTAAGG
AAATGTAAAAAGTAACGAAAAGGCATGTTCCTAGTTTTGCTCATCCACTT
AACATTATATGAAAATAAAATATTCATTCTGCTGCAGTTCTTAGTTGACA
TGTGAAAAGGCTGTATATCTATAAGAAACAAGAAGATAATTATACTGGCA
CAAAATCAGTTATTTTTAGAACATTAATTTAGTCCAAACCCTATAGTCAT
GAACTTTGTGGCCTTTTTTTTTCCCACTGGTAGCCTCCACAATGATCCCG
CCTGGACAAACCCCTTTCTCACTTATTATTTCACTTTTCTTGACCTAACA
GTGTGGATTACACAAACCACAATGCCAGACCTTTAGTCCTGGCCTCTCCT
CTGTTATATACTAGCAATGAGCATACTCACTAAACATTCACAAGTGTGCA
CAAAATCCTCGCTAGAGAAAGTAACCAAGGAGCTAAAGAGATCTGCCGCC
CTGTAAGTGCAACAACAGTATAAACTAACCGGTCCCCCGGAGCCCTTGAT
CCAAGTGCATATGTATCAAAAAAAGGCCAAACCGGCCCTCCCGGGTAAAA
AAGGCTATTGGTACCCCACCTTTTATTGCCCCCCCAACGGGAAAGCCCCC
GCCCAAAAGTGTGAACAGTGGGGTAAGGAGTTCCT

Query= MSMg01no432_p21.g1 MSMg01no432_p21.g1 CHROMAT_FILE:
MSMg01no432_p21.g1 PHD_FILE: MSMg01no432_p21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:57 2005
         (456 letters)



>mm_chr9_90424163_90425019
          Length = 857

 Score =  816 bits (422), Expect = 0.0
 Identities = 449/458 (98%), Gaps = 3/458 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   attgataactaataatacaggccataaaagatgctgttttaaggtgttcttctgaaaaac 60
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 657 attgataactaataatacaggacataaaagatgctgttttaaggtgttcttctgaaaaac 598

                                                                       
Query: 61  attgcgaaggagtaaggaaatgtaaaaagtaacgaaaaggcatgttcctagttttgctca 120
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 597 attgcgaaggagtaaggaaatgtaaaaagtaacgaaaaggcgtgttcctagttttgctca 538

                                                                       
Query: 121 tccacttaacattatatgaaaataaaatattcattctgctgcagttcttagttgacatgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tccacttaacattatatgaaaataaaatattcattctgctgcagttcttagttgacatgt 478

                                                                       
Query: 181 gaaaaggctgtatatctataagaaacaagaagataattatactggcacaaaatca-gtta 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| 
Sbjct: 477 gaaaaggctgtatatctataagaaacaagaagataattatactggcacaaaatcaggtt- 419

                                                                       
Query: 240 tttttagaacattaatttagtccaaaccctatagtcatgaactttgtggccttttttttt 299
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| 
Sbjct: 418 tttttagaacattaatttagtccaaaccctatagtcataaactttgtggccttttttttc 359

                                                                       
Query: 300 ccc-actggtagcctccacaatgatcccgcctggacaaacccctttctcacttattattt 358
           ||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 358 ccccactggtagcctccacaatgatcccgcctggacaaaccccttcctcacttactattt 299

                                                                       
Query: 359 cacttttcttgacctaacagtgtggattacacaaaccacaatgccagacctttagtcctg 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 cacttttcttgacctaacagtgtggattacacaaaccacaatgccagacctttagtcctg 239

                                                 
Query: 419 gcctctcctctgttatatactagcaatgagcatactca 456
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gcctctcctctgttatatactagcaatgagcatactca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 857
Length adjustment: 10
Effective length of query: 446
Effective length of database: 847
Effective search space:   377762
Effective search space used:   377762
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)