Query= MSMg01no433_e15.b1 MSMg01no433_e15.b1 CHROMAT_FILE:
MSMg01no433_e15.b1 PHD_FILE: MSMg01no433_e15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:20 2005
(537 letters)
>mm_chr9_123640173_123641112
Length = 940
Score = 969 bits (501), Expect = 0.0
Identities = 529/540 (97%), Gaps = 3/540 (0%)
Strand = Plus / Minus
Query: 1 tgtctagcctttagacaaagcaactcagagacataggaaaatagcttctacctgctaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tgtctagcctttagacaaagcaactcagagacataggaaaatagcttctacctgctaaag 508
Query: 61 ggaggcttttgtctctagctcttccattaacatatgcctgaggtgccgattagcatatca 120
|||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 507 ggaggcttttatctctagctcttccattaacatatgccagaggtgccgattagcatatca 448
Query: 121 aagtctaggctagcttcttcaatctccactcaacaagttcctgttatatacttcaagttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aagtctaggctagcttcttcaatctccactcaacaagttcctgttatatacttcaagttc 388
Query: 181 tcaagtgcaggtcacaaccagccag---agaagaggtaggtgaactcaggtagagactcc 237
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 387 tcaagtgcaggtcacaaccagccagagaagaagaggtaggtgaactcaggtagagactcc 328
Query: 238 cagcaggaccataaagaagcaatgccagctgctgtctaagtacaggaacaggataatcca 297
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cagcaggaccagaaagaagcaatgccagctgctgtctaagtacaggaacaggataatcca 268
Query: 298 aggaggggctagtgtggaatccccaactgaccaaccgacagaccaacagggaacaacaca 357
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 267 aggaggggctagtgtggaatccccaaccgaccaacggacagaccaacagggaacaacaca 208
Query: 358 ggtaggattgaccaggttggttcagataacacctgatagaggctgctgtgggtggcagcc 417
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ggtaggactgaccaggttggttcagataacacctgatagaggctgctgtgggtggcagcc 148
Query: 418 agctactagagtaattttttctctgagggagcaaaaaatgattcattggaactggcactc 477
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 147 agctactagagtaattttttctctgagggagcaaaatatgattcattggaactggcactc 88
Query: 478 cctgtgatcgatgagaaactctttgaactctttaaattctttggnggctggagaagagaa 537
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 87 cctgtgatcgatgagaaactctttgaactctttaaattctttgggggctggagaagagaa 28
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 940
Length adjustment: 10
Effective length of query: 527
Effective length of database: 930
Effective search space: 490110
Effective search space used: 490110
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_e15.g1 MSMg01no433_e15.g1 CHROMAT_FILE:
MSMg01no433_e15.g1 PHD_FILE: MSMg01no433_e15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:20 2005
(469 letters)
>mm_chr9_123457320_123458193
Length = 874
Score = 804 bits (416), Expect = 0.0
Identities = 457/474 (96%), Gaps = 7/474 (1%)
Strand = Plus / Plus
Query: 1 tagtatttcaaagaacaagcttggaaaacaacaacaagca-----gagtcctgtgtacct 55
|||||||||||||||||||||||||||||||||| ||||| |||||||||| |||
Sbjct: 201 tagtatttcaaagaacaagcttggaaaacaacaataagcaacaataagtcctgtgtgcct 260
Query: 56 tgagattgacgggagagaaaaaatattttctctctactctcgccagctaagcttgactct 115
||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 261 tgagattgacgggagagaaaaaatattttctctctactctcaccagctaagctcaactct 320
Query: 116 ttggctatcgaaaggtttgcttttatcttcttgagaaaaatactgattgtccttttaata 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggctatcgaaaggtttgcttttatcttcttgagaaaaatactgattgtccttttaata 380
Query: 176 ggatttttttctaaatgtatattactctttctattcataaattttaagaatgctttgaaa 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggatttttttctaaatgtatattactctttctattcataaattttaagaatgctttgaaa 440
Query: 236 aatgggccttttattggaggagctcaatgcagtctcatttttccaggctttaaagtcgac 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 aatgggccttttattggaggagctcaatgcagtctcatttttccaggctttaaagttgac 500
Query: 296 atataagggctattaatttgtgttttctgtttgtttttgtgatatgctagtgctcaaacc 355
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 atataagggctattaatttgtgttttctgtttgtttttgtgatatgctagggctcaaacc 560
Query: 356 cagggtctcacacatgccgacccatgggatctaccactgatcttaatcctcagccccatt 415
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 561 cagggtctcacacatgccgacccatgggctctaccactgatcttaatcctcagccccatt 620
Query: 416 ctgtattttttttttttaacatttgccttttctttttttcaggtaattatcttg 469
|||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 621 ctgt--tttttttttttaacatttgccttttctttttctcaggtaattatcttg 672
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 874
Length adjustment: 10
Effective length of query: 459
Effective length of database: 864
Effective search space: 396576
Effective search space used: 396576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
