Query= MSMg01no433_i06.b1 MSMg01no433_i06.b1 CHROMAT_FILE:
MSMg01no433_i06.b1 PHD_FILE: MSMg01no433_i06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:37 2005
(380 letters)
>mm_chr9_26070743_26071522
Length = 780
Score = 669 bits (346), Expect = 0.0
Identities = 370/378 (97%), Gaps = 2/378 (0%)
Strand = Plus / Plus
Query: 4 ggaattctgtttcattcc-accatggggcataagcattggcatcccattttcaccttttg 62
|||||||||||||| ||| | ||||||||||| |||||||||||||||||||||||||||
Sbjct: 204 ggaattctgtttca-tcctagcatggggcatatgcattggcatcccattttcaccttttg 262
Query: 63 ggcacagcatcctgttttctcatggtactgaatagatgggtgcctacctttaccaaccct 122
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ggcacaggatcctgttttctcatggtactgaatagatgggtgcctacctttaccaaccct 322
Query: 123 ctggtatcagcctgcacatctctgtagaaccagccatagtgcaatatcctatagtcatat 182
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctggtatcagcccacacatctctgtagaaccagccatagtgcaatatcctatagtcatat 382
Query: 183 agttctatagggtggatgagagagacatttctccaaatgttggcccccttcaactagcat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 agttctatagggtggatgagagagacatttctccaaatgttggcccccttcaactagcat 442
Query: 243 ataatcttaattgtaataaaactctccatttattattccagtgatttttttacacctgaa 302
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 443 ataatcttaattgtaataaaactctccatttattagtccagtgatttttttacacctgaa 502
Query: 303 tgtatcaataacaactgtgaattaatgacatttaaatcaaataactgaccttctgagctc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tgtatcaataacaactgtgaattaatgacatttaaatcaaataactgaccttctgagctc 562
Query: 363 cataatttgttatccaat 380
||||||||||||||||||
Sbjct: 563 cataatttgttatccaat 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_i06.g1 MSMg01no433_i06.g1 CHROMAT_FILE:
MSMg01no433_i06.g1 PHD_FILE: MSMg01no433_i06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:37 2005
(212 letters)
>mm_chr9_26233309_26233920
Length = 612
Score = 371 bits (192), Expect = e-107
Identities = 207/212 (97%)
Strand = Plus / Minus
Query: 1 taaaggcaaagtgaggagatacacacaaggtatgtctcatcagtgacccttaataacaat 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 412 taaaggcaaagtgaggagatacacacaaggtatgtctcgtcagtgacccttaataacaat 353
Query: 61 agaggtatcagtccagcatgtggaagcagttgctgggcctatggccacacaggtggataa 120
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 352 agaggtatcagtccagcatgcggaagcagttgctgggcttatggccacacaggtggataa 293
Query: 121 ggttgaaatgaccttttttaaggttataatttttgagatattcttagaatagctcatcac 180
||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 292 ggttgaagtgaccttttttaaggttataatttttgagatattcttagaatagttcatcac 233
Query: 181 aagtaggtttgtgtgttcaaggaaacagggaa 212
||||||||||||||||||||||||||||||||
Sbjct: 232 aagtaggtttgtgtgttcaaggaaacagggaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 212
Length of database: 612
Length adjustment: 9
Effective length of query: 203
Effective length of database: 603
Effective search space: 122409
Effective search space used: 122409
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
