Query= MSMg01no438_p07.b1 MSMg01no438_p07.b1 CHROMAT_FILE:
MSMg01no438_p07.b1 PHD_FILE: MSMg01no438_p07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:55 2005
(460 letters)
>mm_chr9_48417651_48418510
Length = 860
Score = 808 bits (418), Expect = 0.0
Identities = 421/422 (99%)
Strand = Plus / Minus
Query: 39 atggttcccccttcctccagctggcaagggggttggggctgttctactatggtgacagct 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 atggttcccccttcctccagctggcaagggggttggggctgttctactatggtgacagct 801
Query: 99 gaaatgaacacacattgcttctctttgcagcctttctactgtttaagaatccctaaacaa 158
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gaaatgaacacacattgcttctctttgcagcctttctactgtttaagaatccctaaacag 741
Query: 159 tagttcacttttgtctgctttatgcttcatagaaagggaatctacaaggtcttcttatga 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tagttcacttttgtctgctttatgcttcatagaaagggaatctacaaggtcttcttatga 681
Query: 219 ttggctgctttcaccccacaccacatggagaatccccagctgatgcctataagctgcccc 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttggctgctttcaccccacaccacatggagaatccccagctgatgcctataagctgcccc 621
Query: 279 agatgcctcattctggcttattcccacttgattccctccactgttgccaggcagttatat 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agatgcctcattctggcttattcccacttgattccctccactgttgccaggcagttatat 561
Query: 339 tgtttctagttgaggctgtcatgggtcatcttcctttaccatttgaacggatttggaatc 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgtttctagttgaggctgtcatgggtcatcttcctttaccatttgaacggatttggaatc 501
Query: 399 actcatgacacatacttccgggtgtgtccttcaggacatttcctggaagggttaagtaag 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 actcatgacacatacttccgggtgtgtccttcaggacatttcctggaagggttaagtaag 441
Query: 459 ca 460
||
Sbjct: 440 ca 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no438_p07.g1 MSMg01no438_p07.g1 CHROMAT_FILE:
MSMg01no438_p07.g1 PHD_FILE: MSMg01no438_p07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:55 2005
(442 letters)
>mm_chr9_48289783_48290624
Length = 842
Score = 841 bits (435), Expect = 0.0
Identities = 441/443 (99%), Gaps = 2/443 (0%)
Strand = Plus / Plus
Query: 1 tgcctcccaagtactaggattaaaagtgtgcaacaccacacctggctatataggaatttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcctcccaagtactaggattaaaagtgtgcaacaccacacctggctatataggaatttg 260
Query: 61 aatccgctgggcttattctcagtattacttctttacattttgaaaggataacatccttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatccgctgggcttattctcagtattacttctttacattttgaaaggataacatccttag 320
Query: 121 gctggagagatggctcaaaggttaagtaagagtacttgctgctcttgcaggggattgaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctggagagatggctcaaaggttaagtaagagtacttgctgctcttgcaggggattgaac 380
Query: 181 ttcagctccgagggattgtgttgccctcttcaaaccttagtgggcaccagtaaacacaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcagctccgagggattgtgttgccctcttcaaaccttagtgggcaccagtaaacacaca 440
Query: 241 tacacacacgtacacacacatacacactgcacaaatagagatcttttttttattacacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacacacacgtacacacacatacacactgcacaaatagagatcttttttttattacacct 500
Query: 301 ttggtggtggtatttaacaatttatatcctgaaaaaccacacccatgatttttttttaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttggtggtggtatttaacaatttatatcctgaaaaaccacacccatgatttttttttaac 560
Query: 361 aatgaatggttacatttaacaatgaaaaattatagctatgtaaatagccacagggaaccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatgaatggttacatttaacaatgaaaaattatagctatgtaaatagccacagggaaccc 620
Query: 421 tatcttcaaaa-taaacagaaac 442
||||| ||||| |||||||||||
Sbjct: 621 tatct-caaaaataaacagaaac 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
