Query= MSMg01no439_g01.b1 MSMg01no439_g01.b1 CHROMAT_FILE:
MSMg01no439_g01.b1 PHD_FILE: MSMg01no439_g01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:29 2005
(364 letters)
>mm_chr9_29728358_29729121
Length = 764
Score = 580 bits (300), Expect = e-170
Identities = 344/384 (89%), Gaps = 40/384 (10%)
Strand = Plus / Plus
Query: 1 aggggctccagcctcttggacaccattaattggtttctctagcatgcatatacaggcaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 aggggctccagcctcttggacaccattaattggtttctctagcatgcatatacaggcaca 248
Query: 61 g--------------------------acacacacacacacacacacacagagggatatg 94
| |||||||||||||||||||||||||||||||||
Sbjct: 249 gacacagacacacacacacacagacacacacacacacacacacacacacagagggatatg 308
Query: 95 gacatatacatatacacacacagagggatatccacatacactcaggcacagatatacaaa 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gacatatacatatacacacacagagggatatccacatacactcaggcacagatatacaaa 368
Query: 155 catacaggaaggcatacacatacatacaaacaaacacacacaaacaaacacacacatata 214
||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 369 catacaggaaggcatacacatacat--------------acaaacaaacacacacatata 414
Query: 215 gacatgcaaccatttatacatagacacagctatacacaaaaatatatacaaagagagaca 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gacatgcaaccatttatacatagacacagctatacacaaaaatatatacaaagagagaca 474
Query: 275 cacagagaaacacatgagaagcatgtgtgtgtgcgtatacatctctctctttcacacaca 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 cacagagaaacacatgagaagcatgtgtgtgtgcgtatacatctctctctttcacacaca 534
Query: 335 cacacacacacacacacacacaca 358
||||||||||||||||||||||||
Sbjct: 535 cacacacacacacacacacacaca 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 127
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space: 268025
Effective search space used: 268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_g01.g1 MSMg01no439_g01.g1 CHROMAT_FILE:
MSMg01no439_g01.g1 PHD_FILE: MSMg01no439_g01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:29 2005
(381 letters)
>mm_chr9_29922733_29923513
Length = 781
Score = 708 bits (366), Expect = 0.0
Identities = 378/382 (98%), Gaps = 1/382 (0%)
Strand = Plus / Minus
Query: 1 ttttgctccctctgtgcatctctgctgttgattaaatggtgccatcctggggcttgttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ttttgctccctctgtgcatctctgctgttgattaaatggtgccatcctggggcttgttca 466
Query: 61 gtttatgaagcagtgttaggaaacaaagtgttaggtctccacataatctcagtttttact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gtttatgaagcagtgttaggaaacaaagtgttaggtctccacataatctcagtttttact 406
Query: 121 ctccaaacaggtactagagcagggcctaactcaaggaaggcaacatagtgatgaaaccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ctccaaacaggtactagagcagggcctaactcaaggaaggcaacatagtgatgaaaccag 346
Query: 181 cctttccagagaattatggctccggtctgagttagtatttatcttgagaaaagattttct 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 345 cctttccagagaattatggctccggtctgagttagtgtttatcttgagaaaagattttct 286
Query: 241 agaagtgtaagggtagtgaatgggagaccctataggttagctattcagaaaaactcaaat 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 agaagtgaaagggtagtgaatgggagaccctataggttagctattcagaaaaactcaaat 226
Query: 301 aactgtaagaatttttttgttttaatttttaaa-tttttattagatattttcttcattta 359
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 225 aactgtaagaatttttttgttttaatttttaaattttttattaggtattttcttcattta 166
Query: 360 catttcaaatgctatcccaaaa 381
||||||||||||||||||||||
Sbjct: 165 catttcaaatgctatcccaaaa 144
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
