Query= MSMg01no439_i14.b1 MSMg01no439_i14.b1 CHROMAT_FILE:
MSMg01no439_i14.b1 PHD_FILE: MSMg01no439_i14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:41 2005
(429 letters)
>mm_chr9_21459494_21460322
Length = 829
Score = 752 bits (389), Expect = 0.0
Identities = 419/429 (97%)
Strand = Plus / Plus
Query: 1 aacgcagggaggtcctgtaaggaaatagcattcagtgacctcactgggaaggctatgtga 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 aacgcagggaggtcctgtaaggaaatagcattcagtgagctcactgggaaggctatgtga 260
Query: 61 gctgcgatgcctgttgtctctagatgagcagaacctggaggtaaagctcacgcattggta 120
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 gctgagatgcctgttgtctctagatgagcagaacccggaggtaaagctcacgcattggta 320
Query: 121 gggaagtcagctgtgaaactggaaagctgtttgaattggtagcgtgtaaaggtgtggtgg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 gggaagtcagctgtgaaactggaaagctgtttgaattggtagcgtgtaaaggtgtgatgg 380
Query: 181 ctgctttggagagcatcagctacagagattcccaagatacccttggaaagaacatgcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgctttggagagcatcagctacagagattcccaagatacccttggaaagaacatgcagt 440
Query: 241 ctgcttgtgtttctaaaggcttacccagcaattcaatgggaagggcatgaagaggcagac 300
||||| | | ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 ctgctagggaaactaaaggcttacccagcaattcaatgggaagggcaggaagaggcagac 500
Query: 301 accactgcattgggaaggagcatctcttcccctgggattgctagggaaccaagatgacat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accactgcattgggaaggagcatctcttcccctgggattgctagggaaccaagatgacat 560
Query: 361 ggcacctctcttggtaggaggaggaagaggagcagcctcagcccgcacagccccctacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggcacctctcttggtaggaggaggaagaggagcagcctcagcccgcacagccccctacac 620
Query: 421 tgcctgtgg 429
|||||||||
Sbjct: 621 tgcctgtgg 629
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no439_i14.g1 MSMg01no439_i14.g1 CHROMAT_FILE:
MSMg01no439_i14.g1 PHD_FILE: MSMg01no439_i14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:05:41 2005
(241 letters)
>mm_chr9_21637150_21637792
Length = 643
Score = 451 bits (233), Expect = e-131
Identities = 240/243 (98%), Gaps = 2/243 (0%)
Strand = Plus / Minus
Query: 1 aagctacgacttcctgcctgcgtgaccgagaaccatcacctcttttttaccttctaccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aagctacgacttcctgcctgcgtgaccgagaaccatcacctcttttttaccttctaccat 384
Query: 61 gtcagctgccagccccggccaggaacagccttggagacgcctgtgggcttcactgtgagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gtcagctgccagccccggccaggaacagccttggagacgcctgtgggcttcactgtgagc 324
Query: 121 --cagttacccagagcttcctccctgccccaccccccaggtctgcagccactcctgaccc 178
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 323 cacagttacccagagcttcctccctgccccatcccccaggtctgcagccactcctgaccc 264
Query: 179 tcattcattccttgccttcccagtggatccctctgttacaacatggccgcctgaggactg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tcattcattccttgccttcccagtggatccctctgttacaacatggccgcctgaggactg 204
Query: 239 gtc 241
|||
Sbjct: 203 gtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 643
Length adjustment: 9
Effective length of query: 232
Effective length of database: 634
Effective search space: 147088
Effective search space used: 147088
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
