Query= MSMg01no440_h24.b1 MSMg01no440_h24.b1 CHROMAT_FILE:
MSMg01no440_h24.b1 PHD_FILE: MSMg01no440_h24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:58 2005
(346 letters)
>mm_chr9_15915128_15915873
Length = 746
Score = 594 bits (307), Expect = e-174
Identities = 333/343 (97%), Gaps = 4/343 (1%)
Strand = Plus / Plus
Query: 5 gaattcctcagacaattcagacctagtgttacctcatctggtatttcctgaggggaaact 64
||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 205 gaattcctcaggcaaagcagacctagtgttaccttatctggtatttcctgaggggaaact 264
Query: 65 ggggtcagactcctgctctgttacccttccctgagacagatccacctgtcattatgctgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggggtcagactcctgctctgttacccttccctgagacagatccacctgtcattatgctgt 324
Query: 125 gactgaaaatgtttctgtggcaaaagttgcctgcaacccacttttatatgaaagtctgac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gactgaaaatgtttctgtggcaaaagttgcctgcaacccacttttatatgaaagtctgac 384
Query: 185 attttgcgtggcagaattaaaaaaaaaa--gcgagagagagaaatcacctcaagccactg 242
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 385 attttgcgtggcagaattaaaaaaaaaaaagcgagagaga--aatcacctcaagccactg 442
Query: 243 acatttctctgggaaagttaccagctccagagagggctgagtggaagtggtagctagccc 302
||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 443 acatttctctgggaaagttcccagctccagagagggctgagtggaagtggcagctagccc 502
Query: 303 caggtattcttcattgttcttcattcattccagaacacttgga 345
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 caggtattcttcattgttcttcattcattccagaacacttgga 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_h24.g1 MSMg01no440_h24.g1 CHROMAT_FILE:
MSMg01no440_h24.g1 PHD_FILE: MSMg01no440_h24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:06:58 2005
(322 letters)
>mm_chr9_16111530_16112251
Length = 722
Score = 615 bits (318), Expect = e-180
Identities = 321/322 (99%)
Strand = Plus / Minus
Query: 1 ttgggtttttcaggaagaggcttacagatgtcactacagaggcagttataaatggcagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttgggtttttcaggaagaggcttacagatgtcactacagaggcagttataaatggcagca 381
Query: 61 taaagttgctcagatagtctctctgtgagtttagagccccatggtgctgggtagcaggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 taaagttgctcagatagtctctctgtgagtttagagccccatggtgctgggtagcaggtg 321
Query: 121 gtgctccatgcagagtagaaagctgtgctccatccatccctcagtgaaaccttgcatggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtgctccatgcagagtagaaagctgtgctccatccatccctcagtgaaaccttgcatggg 261
Query: 181 agtatgctctgcactaggtggtttcagaggcccgctcattcactcatcaagacattgttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agtatgctctgcactaggtggtttcagaggcccgctcattcactcatcaagacattgttg 201
Query: 241 tgttatttcagcaaaattcctaacaagagcagtttaggaggtttatttttggctcacagt 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tgttatttcagcaaaattcctgacaagagcagtttaggaggtttatttttggctcacagt 141
Query: 301 tcaagcgcaactgtctgtcatg 322
||||||||||||||||||||||
Sbjct: 140 tcaagcgcaactgtctgtcatg 119
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
