Query= MSMg01no440_n18.b1 MSMg01no440_n18.b1 CHROMAT_FILE:
MSMg01no440_n18.b1 PHD_FILE: MSMg01no440_n18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:27 2005
(429 letters)
>mm_chr9_4758751_4759579
Length = 829
Score = 779 bits (403), Expect = 0.0
Identities = 420/426 (98%), Gaps = 1/426 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaacctgtattcttattaaagatcagcttttgttaaattgtctttttcacagat 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ggaattcaacctgtatttttattaaagatcagcttttgttaaattgtctttttcacagat 421
Query: 64 tctttgaagatctgttttggtttttttgtttgtttgtttttccatatacttcctgtgcct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tctttgaagatctgttttggtttttttgtttgtttgtttttccatatacttcctgtgcct 361
Query: 124 ctctagtcatcacagttgttcattttactgtgcactggaggacttgatctctttatacat 183
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 360 ctctagtcatcacagttgttcattttactgtgcattggaggacttgatctctttatacat 301
Query: 184 ctactttttatatgcacaaaaatttatgtctagcttttactcatgtgtgtgcatgagagt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ctactttttatatgcacaaaaatttatgtctagcttttactcatgtgtgtgcatgagagt 241
Query: 244 ctctgtgtgtattaatacatgcctaggggcatctctatatgccacaagaggaatacaatc 303
||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct: 240 ctctgtgtgtattaatacatgcctaggggcatctctagaggccaca-gaggaatacaatc 182
Query: 304 cacaaatctagagttattgtcctttgtaagatgtctaatgtcagtactgagaacagaact 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cacaaatctagagttattgtcctttgtaagatgtctaatgtcagtactgagaacagaact 122
Query: 364 tagtcttctggcacagcaaccagcaagcatagccacggngccatctcttcaacttgtcta 423
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 121 tagtcttctggcacagcaaccagcaagcatagccacggtgccatctcttcaacttgtcta 62
Query: 424 ttcttg 429
||||||
Sbjct: 61 ttcttg 56
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_n18.g1 MSMg01no440_n18.g1 CHROMAT_FILE:
MSMg01no440_n18.g1 PHD_FILE: MSMg01no440_n18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:27 2005
(398 letters)
>mm_chr9_4658360_4659158
Length = 799
Score = 710 bits (367), Expect = 0.0
Identities = 391/399 (97%), Gaps = 1/399 (0%)
Strand = Plus / Plus
Query: 1 tagagtcacctaccagttagagacaaattaccccccaaataagagtttttctgtggctgt 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagagtcacctaacagttagagacaaattaccccccaaataagagtttttctgtggctgt 260
Query: 61 aaacaagaat-tatcaattttgggcttaaatattaagacttcttaaatgaaaataaataa 119
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaacaagaatctatcaattttgggcttaaatattaagacttcttaaatgaaaataaataa 320
Query: 120 ggtgtgtgtatgtttgcacatgaataacataccatttactcttacaattagggaattttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtgtgtgtatgtttgcacatgaataacataccatttactcttacaattagggaattttc 380
Query: 180 aattcattacaggttacttttattaaatgatatagtatttaatagccatagctgtttttc 239
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 381 aattcattacaggttacttttattaagtgatatagtatttaatagccagagctgtttttc 440
Query: 240 atactgaacaccgttttttaagactttgacaagtctcaatttatcggagacccgaatgaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 atactgaacaccgttttttaagactttgacaagtctcaatttatcggagacccgagtgaa 500
Query: 300 caacaagtagtcaggaactgatacaaaagcaagaggaattttattgttccagtattctgg 359
|||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 501 caacaagtagtcaggaactgatgcaaaagcaagaggaattttattgttccagcattctgg 560
Query: 360 ggtcgccctgcacacaaaggagagagagaacgaccacac 398
||||||||| |||||||||||||||||||||||||||||
Sbjct: 561 ggtcgccctacacacaaaggagagagagaacgaccacac 599
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 799
Length adjustment: 9
Effective length of query: 389
Effective length of database: 790
Effective search space: 307310
Effective search space used: 307310
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
