Query= MSMg01no440_p23.b1 MSMg01no440_p23.b1 CHROMAT_FILE:
MSMg01no440_p23.b1 PHD_FILE: MSMg01no440_p23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:37 2005
(465 letters)
>mm_chr9_61420416_61421280
Length = 865
Score = 826 bits (427), Expect = 0.0
Identities = 451/459 (98%)
Strand = Plus / Minus
Query: 7 gaattcaaactctgattccatgaccttggcctttggtatctctgtctcctttccctgtgg 66
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 665 gaattcaaactctgattccatgaccttggcctttggtatctctgtctcttttccctgtgg 606
Query: 67 aatagacagggtagttctcacaaactgcacagaggactaagttcatggagaaagtatggg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 aatagacagggtagttctcacaaactgcacagaggactaagttcatggagaaagtatggg 546
Query: 127 gacaggactgagcttggctccatgcctgttcccagacagtcaccaggtgagacaatttgc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gacaggactgagcttggctccatgcctgttcccagacagtcaccaggtgagacaatttgc 486
Query: 187 cctctcctgggcctgtctccacagaactcgcaatgccaggccaaggcagtcacagctagg 246
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 485 cctctcctgggtctgtctccacagaactcgcaatgccaggctaaggcagtcacagctagg 426
Query: 247 agttgtatgtcttcttcctccggagtgcagagtggtcaaacagaggtcagtggagttgag 306
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 425 agttgtatgtcttcttcctctggagtgcagagtggtcaaacagaggtcagtggagttgag 366
Query: 307 ggaaacctctaaagatggttgcttgggacttggggaaggcacaggccgcttaaatcaaag 366
|||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 365 ggaaacctctgaagatggttgcttgggacttggggaaggcacaggccacttaaatcaaag 306
Query: 367 tgaaccgggttcctttatacgccctaggctgggaactcctggccagtgctcatgtcaggc 426
||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 305 tgaaccggggtcctttatacgccctaggctgggaactcttggccagtgctcatgtcaggc 246
Query: 427 aatgattcaacaggacaagacctgaactgctgtttctca 465
|||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aatgattcaacaggacaagacctgaactgctgtttctca 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no440_p23.g1 MSMg01no440_p23.g1 CHROMAT_FILE:
MSMg01no440_p23.g1 PHD_FILE: MSMg01no440_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:38 2005
(421 letters)
>mm_chr9_61318548_61319369
Length = 822
Score = 745 bits (385), Expect = 0.0
Identities = 412/421 (97%), Gaps = 1/421 (0%)
Strand = Plus / Plus
Query: 2 tggaactcagcttccgcagactagtttccttttggggactgatgcccctggggagccaag 61
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 202 tggaactcagcttctgcagactagtttccttttggggactgatgcccctgaggagccaag 261
Query: 62 gtccccactgtgtggctgagctggggaggtcagctgggtgatatcctccatgctgctgac 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gtccccactgtgtggctgagctggggaggtcagctgggtgatatcctccatgctgctgac 321
Query: 122 accgggacaagagcttgtttttcctggaagcagagcttgagtgataaacggtctggcctc 181
|| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 322 actgggacaagagcttgtttttcctggaagcagagcttgaatgataaacggtttggcctc 381
Query: 182 caagatgaaggccaccaccataactcacagcgccaaaaggccctggaagcattcattggg 241
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 382 caagatgaaggccaccaccataactcacagcgccaagaggccctggaagcattcattggg 441
Query: 242 cattctttgtttttttcaaggcaggtgagggctacactttttaaaatggagggtgaaaaa 301
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cattctttgtttttctcaaggcaggtgagggctacactttttaaaatggagggtgaaaaa 501
Query: 302 tggcctggctgtgcctggggagtgaggccaactgttagaagaactctcttgcctcaagtc 361
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tggcctggcggtgcctggggagtgaggccaactgttagaagaactctcttgcctcaagtc 561
Query: 362 catatggcttctagaaggcagctctgcattacaaagccctcctt-gttccctttgtctag 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 562 catatggcttctagaaggcagctctgcattacaaagccctccttcgttccctttgtctag 621
Query: 421 a 421
|
Sbjct: 622 a 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 822
Length adjustment: 9
Effective length of query: 412
Effective length of database: 813
Effective search space: 334956
Effective search space used: 334956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
