AATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCACCTATTCTTCTAGGCTGGCAAACCAGCACCAGATCCACTGTCTCCA
TTTCCTAGAGGATGACATTACAAGTGTGAATCACCACTTTTCACATGGCT
GCTGGAGGGCTCTGAACTCAGATCTTTTTATATAGCAAGTATTCTACTGA
CTGAGCCATTTCCCCAACCCCAGAGCCCACTCCTCTAATGCTCAAATCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTTTCATGCACACGCACACACACACACACACAC
ACACACACACACACACCCACACAAGCAAGCAGGTGTTTCCCATGGCCTCC
TTACAGATAACCAACACTGCAGGCCAGCTTACAGCCTAGAGAAGCTGTCC
ACAGTGACCCTGGGCACGGCGACTACATATCTATCTGACTGCGGTAAGGG
GGGACAGTTGCCATCCAGGCCTTCCTGTCTGCCTGAAAGATACCAACATG
TTTGATAGTAATCTCCTCGTTTCAATATCTGCTACTCCTGTGTTTATCTC
CCTACCCCTTATGTTAATTATATTTATCTTACCGCCCAGTTTTGCTCTTT
TGTCTCCCCCTTTTTTTTTTTTTCTCTCCTTTTCCCTTCCTCCTTTTATT
ACCTTCCTCTTCATTTCTTCTTCTCTACCCTCTTATTCTCCTTTTTTTTC
CCCTTCTCCCCCTTCCTTTTCCCTTACTTTCATAT

CATTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATTAAAACCAAATTACAAGCAAAACT
CATTCATGAAGGTGATCACAGCTACTCTTTGTTCATGGTGTTGCTGCTAC
CCAACTTTGGTCATTGTCTTGATTGTCTCTGTCCTCAGTGATTTACAAAT
CCAGAGCAAAGTAGGGGAAACATAAAATTTATTTTTTCCACAATTTGAGG
CATGAGCTTCCCTAGCATTTCAGAGCCCTCCATTTTTGTGATGGGCTTTG
ATTCAATCCAGCCTGAATGAGAGACATTTCATCACCCCAGAATGCATTTC
TTTATTTGCCTTGGATCTATGATTCTGTCAGTATTGAGAGAAAAGAAAAA
TCAATGCTGCACTATAAACCCCGGGCCGCCTCTGGCCAACGTGGTCAGCA
TGGTGTGAGCAAAGGAAATGGCAGGGGAAAAAATTGACCGCTCAGCAAGA
GTGTGGCCAGTAACGGACACGGCTCAGGGCTAATAACAGCTTGCAATTAC
ACATGGAAAAGCCAGAGCGTGTACGGAACTCCGTGGGAGGGGGATGAAAA
CAATTTATTGAACCCCCGGTAAAAGTCGGAAATTTTTAAATAAAAAAAGG
TTTGACTTCCTCCCTTAAAAAATGAATTTCTGGCGCCTCGCCCTGAATTT
ATTTTTGTAAACTGCCACCCAAAACTTTCCTTCCTATTTTTGTTCCCCCC
CCTACATCTTTGTCTTTAAATTGTTGTTTTCCCCCC

Query= MSMg01no441_d22.g1 MSMg01no441_d22.g1 CHROMAT_FILE:
MSMg01no441_d22.g1 PHD_FILE: MSMg01no441_d22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:07:57 2005
         (443 letters)



>mm_chr9_74559415_74560256
          Length = 842

 Score =  826 bits (427), Expect = 0.0
 Identities = 439/443 (99%), Gaps = 1/443 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   attaaaaccaaattacaagcaaaactcattcatgaaggtgatcacagctactctttgttc 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 642 attaaaaccaaattacaagcaaaactcattcatgaaggtgatcacagcaactctttgttc 583

                                                                       
Query: 61  atggtgttgctgctacccaactttggtcattgtcttgattgtctctgtcctcagtgattt 120
           ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 582 atggtgttgctgctacccagctttggtcattgtcttgattgtctgtgtcctcagtgattt 523

                                                                       
Query: 121 acaaatccagagcaaagtaggggaaacataaaatttattttttccacaatttgaggcatg 180
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 522 acaaatccagagcaaagtaggggaaacataaaattta-tttttccacaatttgaggcatg 464

                                                                       
Query: 181 agcttccctagcatttcagagccctccatttttgtgatgggctttgattcaatccagcct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 agcttccctagcatttcagagccctccatttttgtgatgggctttgattcaatccagcct 404

                                                                       
Query: 241 gaatgagagacatttcatcaccccagaatgcatttctttatttgccttggatctatgatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gaatgagagacatttcatcaccccagaatgcatttctttatttgccttggatctatgatt 344

                                                                       
Query: 301 ctgtcagtattgagagaaaagaaaaatcaatgctgcactataaaccccgggccgcctctg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ctgtcagtattgagagaaaagaaaaatcaatgctgcactataaaccccgggccgcctctg 284

                                                                       
Query: 361 gccaacgtggtcagcatggtgtgagcaaaggaaatggcaggggaaaaaattgaccgctca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gccaacgtggtcagcatggtgtgagcaaaggaaatggcaggggaaaaaattgaccgctca 224

                                  
Query: 421 gcaagagtgtggccagtaacgga 443
           |||||||||||||||||||||||
Sbjct: 223 gcaagagtgtggccagtaacgga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 842
Length adjustment: 10
Effective length of query: 433
Effective length of database: 832
Effective search space:   360256
Effective search space used:   360256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)