Query= MSMg01no441_p21.b1 MSMg01no441_p21.b1 CHROMAT_FILE:
MSMg01no441_p21.b1 PHD_FILE: MSMg01no441_p21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:58 2005
(409 letters)
>mm_chr9_74626183_74626991
Length = 809
Score = 727 bits (376), Expect = 0.0
Identities = 403/420 (95%), Gaps = 14/420 (3%)
Strand = Plus / Plus
Query: 4 tgtctcaaaatataatgtgagaggttatagaggaagatgcccagtataaactttgacctc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tgtctcaaaatataatgtgagaggttatagaggaagatgcccagtataaactttgacctc 249
Query: 64 acaggcacatccatgtgtacttacactcaaatacacatgtgcacaag------cacacac 117
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 250 acaggcacatccatgtgtacttacactcggatacacatgtgcacaagcacacacacacac 309
Query: 118 acacacacacacacacacacacacacaca--------gagtgaccttctgtgtattcctt 169
||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 310 acacacacacacacacacacacacacacacacacagagagtgaccttctgtgtattcctt 369
Query: 170 ctgacaattccctcaagttcaagcctgtcctggcagggactggtgcatccctgtgggatt 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ctgacaattccctcaagttcaagcctgtcctggcagggactggtgcatccctgtgggatt 429
Query: 230 tggtacaatattttgttcttctgatggaaatgtatgctgtctggtccctatagtttaatt 289
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 430 tggtacaatattttgttcttctgatggaaatgtgtgctgtctggtccctatagtttaatt 489
Query: 290 tagaacaattaaggttcagagaacatgagctggcaaggcatattacaaacaatggctgca 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tagaacaattaaggttcagagaacatgagctggcaaggcatattacaaacaatggctgca 549
Query: 350 gaacaaactgcaaatcaatccacagtaaatcaccctgaaattccccgcctgctccacaga 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gaacaaactgcaaatcaatccacagtaaatcaccctgaaattccccgcctgctccacaga 609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no441_p21.g1 MSMg01no441_p21.g1 CHROMAT_FILE:
MSMg01no441_p21.g1 PHD_FILE: MSMg01no441_p21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:58 2005
(399 letters)
>mm_chr9_74764264_74765062
Length = 799
Score = 741 bits (383), Expect = 0.0
Identities = 395/399 (98%)
Strand = Plus / Minus
Query: 1 tttgtgtataaattacttagttggggtgtggcaacatgcctcaccactccaggcaccaat 60
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 599 tttgtgtatgaattacttagttggggtgtggcaacatgccccaccactccaggcaccaat 540
Query: 61 acctgctctgctgagccccttgaccagtactgtgactggcccagtcagactcattctgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 acctgctctgctgagccccttgaccagtactgtgactggcccagtcagactcattctgtg 480
Query: 121 agactcctcatgtcctgcagaggggaagtgctgagttagattctgtgaaagcagtccagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 agactcctcatgtcctgcagaggggaagtgctgagttagattctgtgaaagcagtccagc 420
Query: 181 cttaaggagaaggaaccctggggtaggagaggctgggctgactgggagagttagggcatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 cttaaggagaaggaaccctggggtaggagaggctgggctgactgggagagttagggcatc 360
Query: 241 tgctggctggtggtaggggccattagttttgcagacttgcttgctgcagagcctctgggt 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 359 tgctggctggtggtaggggccatcagttttgcagacttgcttgctgcagagcctctgggt 300
Query: 301 gacacctggtgacagggcagtgtgggcctcttggaccatcacaagtgacattgtctgtga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gacacctggtgacagggcagtgtgggcctcttggaccatcacaagtgacattgtctgtga 240
Query: 361 agctggcagtgtgaatgtggagactttctcttctgttct 399
||||||||||||||||||||||||||||||||| |||||
Sbjct: 239 agctggcagtgtgaatgtggagactttctcttcagttct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
