CTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTTGTTCACTTCTGAGCCCCATTTTTTAATGGGGTTATTTGAT
TTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCC
CCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTC
TTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTC
ATTAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGT
TCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCA
CTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTG
ATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCG
CATTCTTCTACACGATAACAACCAGTTGTGCCAGCACCAATTGTTGATAA
TGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAACATTATG
TGACCATATGTGTGTGGTTCTCACTTCCGGGTCTATTTTTTCTACTCTTT
TTTTTCCCCTTGTCTTTTCTCTATCCTATACTCTGGTGTTTTTTTTTCAT
ATCGCCCTCCTTTGTCTATTCTTTCTTTTTTTTCTGCGCTCCTTTATGTT
CTATTTACTTTCTTCTCTTTCCCCACTTCTCTCTTCTTCTCCCCCTCTTT
CTTTCTCCTATCTCCCCCTTTTATTTTTCCTCTTTT

NCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTTTTTAATTTCTACTCATATAAG
TTGATGCTCATTAGATGGGTCATAAATTACCTATCAAGTATTAGAGCATG
TTTCTGAAAGATAAAGTGGGGGCTCTTATAGTGATTTGGCTCACCAAACC
CTTCATGGCTTTCTGCTGTGTGAACTTTCTCTCAACATTACTGAGACAGC
ATGACCCTGTTGCTCTCTTGTTATCCTTCCTACCAAGTCTAGAATTCAGT
CCCTAAGGTACTGTGTTTTAATTACTGTATGACAAGGATTGTTTGTTTTT
CATGTATATATATATATATGTATATATATATATATATATATATATACATA
GATATATATATATTATAAAAAATATATTTGTTATTTATTNTGAAAAAAAT
AAATATTTGATANTGTATATATATATTTATATAAATATATATTTTATTAT
ATATATATATAATAAGTTTTATTTTGAAATATAAGTTATATAATGTGTTT
GTATATATTTGTTATGGGGGGGAGTTTTTTTTTTAGAAAATAGTTTTTTT
AATTTTTGTTATGGTTTTTTTTTTTTTGAGGGTGAGAGTTTTTTATAGTG
GGGGATTTTTTTATATTTTTTTTGTGGTGTTTAATATTGTTGTTTTTTTT
TTTATATTTTTTGTCAGATAATTTGGTTTTTTTTTGTGTTTTAGTGGGGA
TTTAGTTTTTTTTATG

Query= MSMg01no442_b14.g1 MSMg01no442_b14.g1 CHROMAT_FILE:
MSMg01no442_b14.g1 PHD_FILE: MSMg01no442_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:07 2005
         (323 letters)



>mm_chr9_86720262_86720984
          Length = 723

 Score =  578 bits (299), Expect = e-169
 Identities = 317/325 (97%), Gaps = 4/325 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttttaatttctactcatataagttgatgctcattagatgggtcataaattacctatcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttttaatttctactcatataagttgatgctcattagatgggtcataaattacctatcaa 260

                                                                       
Query: 61  gtattagagcatgtttctgaaagataaagtgggggctcttatagtgatttggctcaccaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtattagagcatgtttctgaaagataaagtgggggctcttatagtgatttggctcaccaa 320

                                                                       
Query: 121 acccttcatggctttctgctgtgtgaactttctctcaacattactgagacagcatgaccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acccttcatggctttctgctgtgtgaactttctctcaacattactgagacagcatgaccc 380

                                                                       
Query: 181 tgttgctctcttgttatccttcctaccaagtctagaattcagtccctaaggtactgtgtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgttgctctcttgttatccttcctaccaagtctagaattcagtccctaaggtactgtgtt 440

                                                                       
Query: 241 ttaattactgtatgacaaggattgtttgtttttcatgtatatatatat----atatgtat 296
           |||||||| ||||||||||||||||||||||||||||||||| | |||    |||| |||
Sbjct: 441 ttaattacagtatgacaaggattgtttgtttttcatgtatatgtgtatgtgtatatatat 500

                                    
Query: 297 atatatatatatatatatatataca 321
           |||||||||||||||||||||||||
Sbjct: 501 atatatatatatatatatatataca 525



 Score = 58.7 bits (30), Expect = 5e-13
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                             
Query: 288 tatatgtatatatatatatatatatatatataca 321
           ||||| ||||||||||||||||||||||||||||
Sbjct: 523 tatatatatatatatatatatatatatatataca 490



 Score = 54.9 bits (28), Expect = 7e-12
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 292 tgtatatatatatatatatatatatata 319
           ||||||||||||||||||||||||||||
Sbjct: 525 tgtatatatatatatatatatatatata 498


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space:   224196
Effective search space used:   224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)