AAACATGGTCCANTGTCACNNNNNNNTCCTNTTTTCAGAAGATCCGCGGA
ATTCAACGGAGTTCCTGTTCATCTCTCTGCCCCATGAGTACAGATGTTAA
GTGAGTTGCCCTCACTGTGGATGGGAGACCTCAGACTCCAGCATGGAGCA
GAAGGTCGAGTCAGGTGAGGTGGAATGCCAGGAAGACTGCACATGGGTGA
GGGAGTGAGGACCCCACCCCTGGACAACAATGAGCCCAAGTGAGCTTCAG
AGGAGGATGGGGGTGCCGCCATCGCAGAAGTCCATGCCCTCCTCCCCCGC
TCTCCCTGCTTATATACACTGTTTAGTTAGCATGAAACCGTGTGTGTATT
TGATGCTAGAGACTGGACAGAGAACAGGGTGGCAGGCAGTCCTGGTTCTG
GATCTTTGATCCTAGCCAGTGAGCCATAAACAAGTAGATGATGATGCACG
TAACCATGACGAGCGCCTCCCTCGCACCAGGTACTACATGAGCGTTTTAT
GTACAGTCCTGTGCCTAGCCAGCCATAGGCATGCACTCAGAGGGATGCTT
CAGTAGGTGATTTCATCATGGCTGAGTCTCCCAGTATGTACTTACAGTAA
GCTAACGCAGCTATGTGGTGCCATCTACGGGACTGCCATCATGTTTGCAA
TCCGTCTTCTTCGCTGTGTTTTGCACGACTATATTTTTTGTGGGGTCTCT
TTCCTTTTTCGATTGTAATCTGTCTN

NTACGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCACGCCCTTTGAGATGGGATACCAA
GAGAATGTTGTGAATGCCAGCTCTGCTAATTCAATTACCAACCACCTACT
CTGGGAGTGGAGCGGTCAGAAGACAGGGCGATCCCCATTCCACCGTAGGG
CGCTTGCTCGCTGTGTTCCACAGCAGTTGTGGGGACGTTCATTTCGGGAC
TCATTAAAATGCCTGAGACCTGATACCACTTGGTTAACCGTACCTGTCCT
AACATAAATGAGCCAATTCCATTCTGTTCCATTCTGCGAAATGTGAACTA
CATTTACATTCCTGGTCGCCTCCCACTTTAATATCTTGTATTAAGTTACA
TGGCTGTGAATGGCTACCAGGTGTCTCTCGGTACTGTCTGATGGATGGTC
AGATGACGTGATTTCCCTAAAGCAGAGGAAGGGTTGCATGTTCAGCATCC
ACTTCAAGCCTGTGGTGCTTCCGACCCACAGAGAAGCAGACGCTCTAAGT
CACTCCTGATTGGTTCTGCGTGTCCAGCAGGGGTGGGGCTGCCTAATACA
AGGCCGGAAATGGAAATAACAGTCCCGGGGAGTCCTCAGCTGTGATGCAC
CTAGCTTTATGGGACCCACGCTTTCGAAAGGGCGGGGACCCCGCTTTTCG
GGGGTGCNACTACCCCTCACTCTTAGAACGCCGAAAAGTTN

Query= MSMg01no443_a19.b1 MSMg01no443_a19.b1 CHROMAT_FILE:
MSMg01no443_a19.b1 PHD_FILE: MSMg01no443_a19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:31 2005
         (248 letters)



>mm_chr9_118592934_118593581
          Length = 648

 Score =  441 bits (228), Expect = e-128
 Identities = 243/248 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atctctctgccccatgagtacagatgttaagtgagttgccctcactgtggatgggagacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctctctgccccatgagtacagatgttaagtgagttgccctcactgtggatgggagacc 260

                                                                       
Query: 61  tcagactccagcatggagcagaaggtcgagtcaggtgaggtggaatgccaggaagactgc 120
           |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 261 tcagactccagcatggagcagaaggtggagtctggtgaggtggaatgccaggaagactgc 320

                                                                       
Query: 121 acatgggtgagggagtgaggaccccacccctggacaacaatgagcccaagtgagcttcag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatgggtgagggagtgaggaccccacccctggacaacaatgagcccaagtgagcttcag 380

                                                                       
Query: 181 aggaggatgggggtgccgccatcgcagaagtccatgccctcctcccccgctctccctgct 240
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||
Sbjct: 381 aggaggatgggggtgccgccatcgcaggagtccatgccctcctcccccgctctccccact 440

                   
Query: 241 tatataca 248
           ||||||||
Sbjct: 441 tatataca 448


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space:   152721
Effective search space used:   152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no443_a19.g1 MSMg01no443_a19.g1 CHROMAT_FILE:
MSMg01no443_a19.g1 PHD_FILE: MSMg01no443_a19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:31 2005
         (484 letters)



>mm_chr9_118771380_118772263
          Length = 884

 Score =  866 bits (448), Expect = 0.0
 Identities = 475/484 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   acgccctttgagatgggataccaagagaatgttgtgaatgccagctctgctaattcaatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 acgccctttgagatgggataccaagagaatgttgtgaatgccagctctgctaattcaatt 625

                                                                       
Query: 61  accaaccacctactctgggagtggagcggtcagaagacagggcgatccccattccaccgt 120
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 accaactacctactctgggagtggagcggtcagaagacagggcgatccccattccaccgt 565

                                                                       
Query: 121 agggcgcttgctcgctgtgttccacagcagttgtggggacgttcatttcgggactcatta 180
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 564 agggcgcttgctcgctgtgttccacagcagttgtggggaagttcatttcgggactcatta 505

                                                                       
Query: 181 aaatgcctgagacctgataccacttggttaaccgtacctgtcctaacataaatgagccaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaatgcctgagacctgataccacttggttaaccgtacctgtcctaacataaatgagccaa 445

                                                                       
Query: 241 ttccattctgttccattctgcgaaatgtgaactacatttacattcctggtcgcctcccac 300
           |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct: 444 ttccattctgttccattcagcgaaatgtgaactacatttccattcctggtcgcctcccac 385

                                                                       
Query: 301 tttaatatcttgtattaagttacatggctgtgaatggctaccaggtgtctctcggtactg 360
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 384 tttaatatcttgtattaagttacatggctgcgaatggctaccaggtgtctctcggtactg 325

                                                                       
Query: 361 tctgatggatggtcagatgacgtgatttccctaaagcagaggaagggttgcatgttcagc 420
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 324 tctgatggatggtcagatgacgtgattttcctaaagcagaggaagggttgcatgttcagc 265

                                                                       
Query: 421 atccacttcaagcctgtggtgcttccgacccacagagaagcagacgctctaagtcactcc 480
            |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 264 gtccacttcaagcctgtggtgcttccgacccacagagaagcagacgctctgggtcactcc 205

               
Query: 481 tgat 484
           ||||
Sbjct: 204 tgat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space:   414276
Effective search space used:   414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)