Query= MSMg01no443_b06.b1 MSMg01no443_b06.b1 CHROMAT_FILE:
MSMg01no443_b06.b1 PHD_FILE: MSMg01no443_b06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:33 2005
(563 letters)
>mm_chr9_8717022_8717984
Length = 963
Score = 1046 bits (541), Expect = 0.0
Identities = 553/557 (99%)
Strand = Plus / Plus
Query: 7 gaattctttaaatctcttgaaagataccaattcataaacaaaagattgttaaatagtttc 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctttaaatctcttgaaagataccaattcataaacaaaagattgttaaatagtttc 266
Query: 67 caagttgaatctgatgaaggctttactcaggtactcataatgaaagtatttatgataaga 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 caagttgaatctgatgaaggctttactcaggtactcataatgaaagtatttatgataaga 326
Query: 127 aatctttaagtatttaaggtaatgaatatgttcaactctgacttgatcactgtcatacat 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aatctttaagtatttaaggtaatgaatatgttcaactctgacttgatcactgtcatacat 386
Query: 187 atgaatcaattccacatcagaagtcataagtacatataaatatatgccagtcaaaaagca 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atgaatcaattccacatcagaagtcataagtacatataaatatatgccagtcaaaaagca 446
Query: 247 aaataaattttaacaaaaccagtgtttactgtgattgagtggaatttattttacatgtga 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aaataaattttaacaaaaccagtgtttactgtgattgagtggaatttattttacatgtga 506
Query: 307 gaaggacatgagtgtttgagaaggtcaagctttgaaatttgggtcttaccagtgtgatgg 366
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 507 gaaggacatgagtgtttgagaaggtcaagctttgaaatttgagtcttaccagtgtgatgg 566
Query: 367 atgaaggagagcctttccactaaaacattctaagggaaagaagacttgtttgtcctggta 426
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 567 atgaaggagagcctttccactaaaacattctaagggaaagaagacttgtatgtcctggta 626
Query: 427 gtttcagaattcccaactggttccaatgctgtgactataatgagagtgaacatggtacaa 486
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gttttagaattcccaactggttccaatgctgtgactataatgagagtgaacatggtacaa 686
Query: 487 gagagcacatgccagcaaagcctgctcaaccatgaggtgaccagaaagctgggacaagaa 546
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gggagcacatgccagcaaagcctgctcaaccatgaggtgaccagaaagctgggacaagaa 746
Query: 547 gagggaagagaataacc 563
|||||||||||||||||
Sbjct: 747 gagggaagagaataacc 763
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space: 527009
Effective search space used: 527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no443_b06.g1 MSMg01no443_b06.g1 CHROMAT_FILE:
MSMg01no443_b06.g1 PHD_FILE: MSMg01no443_b06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:10:33 2005
(468 letters)
>mm_chr9_8745817_8746684
Length = 868
Score = 812 bits (420), Expect = 0.0
Identities = 438/444 (98%)
Strand = Plus / Minus
Query: 25 ggcaaaattggaaactggggccagggataacacaaaagttctttgttgccatgtagaatg 84
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 868 ggcaaaattggaaactggggccagggagaacacaaaagttctttgttgccatgtagaatg 809
Query: 85 gactcaagttatctttgccccatgattattataattagttatgagcccaagggcagggtt 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 gactcaagttatctttgccccatgattattataattagttatgagcccaagggcagggtt 749
Query: 145 gtacaattcacttttcttctctccagagctgtaacagtggctgatatccagaacatgctg 204
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 748 gtacaattcacttttcttctcttcagagctgtaacagtggctgatatccagaacatgctg 689
Query: 205 aataaatatttactgaatgaccagcagctaagagacttttacatggtgagaacagggaca 264
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 688 aataaatatttactgaatgaccagcagctaagagacttttacatggggagaacagggaca 629
Query: 265 aggactggaaatgagaatttagtaaaatttctacttaatgggcaatagacttgtacatag 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 aggactggaaatgagaatttagtaaaatttctacttaatgggcaatagacttgtacatag 569
Query: 325 attgcagattgggaaaggatgaagagggacagaggctgaatttgtgcctgggtttgtgat 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 attgcagattgggaaaggatgaagagggacagaggctgaatttgtgcctgggtttgtgat 509
Query: 385 tgagagttggacagaatgtcaagtatctttcacatatcttgagcaaatggctcaaagctg 444
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 508 tgagagttggacagaatgtcaagtatctttcacatatcttgagcagatggctcagagctg 449
Query: 445 gagggaggctggcgtgaatgggac 468
|||||||||||||||||| |||||
Sbjct: 448 gagggaggctggcgtgaacgggac 425
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 868
Length adjustment: 10
Effective length of query: 458
Effective length of database: 858
Effective search space: 392964
Effective search space used: 392964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
