Query= MSMg01no446_l20.b1 MSMg01no446_l20.b1 CHROMAT_FILE:
MSMg01no446_l20.b1 PHD_FILE: MSMg01no446_l20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:21 2005
(513 letters)
>mm_chr9_68464108_68465018
Length = 911
Score = 911 bits (471), Expect = 0.0
Identities = 500/510 (98%), Gaps = 2/510 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaaatgtgtttcactttaataccctttaagtgtggtaactcttgctctcagcac 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaaatgtgtttcattttaataccctttaagtgtggtaactcttgctctcagcac 263
Query: 64 acagacctttcttattccttcaccggctttgtgttgttacatagcttacaaccaagttat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acagacctttcttattccttcaccggctttgtgttgttacatagcttacaaccaagttat 323
Query: 124 acaattttaaaatgttttaggccaacaagattaaaattatctacttagctccatacagca 183
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 324 acaattttaaaatgttttaggccaacaagattaaaatgatctacttagctccatacagca 383
Query: 184 gcacgttaatcagagtgtgtagaattgattaaacatatttttacatggggatgctgttct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gcacgttaatcagagtgtgtagaattgattaaacatatttttacatggggatgctgttct 443
Query: 244 gtgaatcgtgggaagatgcataacataacactatatatatgtattgtatttctggttcct 303
||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 444 gtgaatcgtgggaagatgcataacataacactatata-atg-attgtatttctggttcct 501
Query: 304 gggaagttagaatttggaatttggtagctgggaagttccaaagccccctgttgggatctg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gggaagttagaatttggaatttggtagctgggaagttccaaagccccctgttgggatctg 561
Query: 364 gatgacaggagagctgtcatcactggtgtggccctcaccctgagacctttcatttactga 423
||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 562 gatgacaatagagctgtcatcaccggtgtggccctcaccctgagacctttcatttactga 621
Query: 424 tgcctttgggaagaatggcaaaccgagatggtaatgtggtctgtctcatttttccaccca 483
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct: 622 tgcctttgggaagaatggcaaactgagatgataatgtggtctgtctcatttttccaccca 681
Query: 484 agtgttaggtctcanacccaggacaaatgg 513
|||||||||||||| |||||||||||||||
Sbjct: 682 agtgttaggtctcaaacccaggacaaatgg 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 911
Length adjustment: 10
Effective length of query: 503
Effective length of database: 901
Effective search space: 453203
Effective search space used: 453203
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no446_l20.g1 MSMg01no446_l20.g1 CHROMAT_FILE:
MSMg01no446_l20.g1 PHD_FILE: MSMg01no446_l20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:21 2005
(243 letters)
>mm_chr9_68643428_68644070
Length = 643
Score = 462 bits (239), Expect = e-135
Identities = 242/243 (99%)
Strand = Plus / Minus
Query: 1 aacttgctggccccaagccctgcccaccagtgtcaaaatacattcttttcccccaggctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aacttgctggccccaagccctgcccaccagtgtcaaaatacattcttttcccccaggctc 384
Query: 61 ttggtggggtcttcagacataaaacaatgaatgctttgccatttgcgcagctgcttcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttggtggggtcttcagacataaaacaatgaatgctttgccatttgcgcagctgcttcaca 324
Query: 121 gacttttgaggggcctatttcatctaaaagctacaatcaatttaagtactggaaatttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gacttttgaggggcctatttcatctaaaagctacaatcaatttaagtactggaaatttat 264
Query: 181 atatagcctgcatccactaagaagtaagagggaagcccccagtaatcatgaattcctgca 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 acatagcctgcatccactaagaagtaagagggaagcccccagtaatcatgaattcctgca 204
Query: 241 tac 243
|||
Sbjct: 203 tac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
