NCTTCCTTTATTTTTTTCGCTATTACCCCAAAANGGANNGNNNNNNNNNG
GGTAATTNNNNNNNNNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXTTCCCAGAAAGGGATCCGGCGGGNAAATTCCTCCAAAAGTTCCC
ACCACAGGAAAAGGTACCCTTTGGAAACCGGAGGAAAGGCAAGGTTCATT
CTTTCAATGTGGGAAAACTCCCGGGGGGAACCACGGGTTTCCCCCCCGCG
GAATTGCCAAAGGTTGGGAAAAAAATTGAAAAACAATATAACGGGGAGGG
GGAAATTGTGCCCCCAGAAGGGGGGGGCCCCCCCCGGGAAAACCCCTTTA
AAAAAGGGGGGTTTGTATTTTTTGGCGGGGGGGCGGGGTATATCGGGGGA
GGAAAGGGGGGGGGCCCCAAAAAAAAAAAAAAATATTTATTTTTTTTTTT
TTTTTGGTGGGGGGGAGAAAAAATATTGGTTTTTCTTTTCGGGGGGAAAA
CAAACAACACCCGAGGAGGGGGGGGAAAAAAAAAAAAAAAAAAAATAAAC
CCCCCCCCCCCCCCCCGAGGGAGAGAAAAAAAAAAAAAACATGTCGGTGG
GAGGGAAAAAATTTTTCTTTCCCTCTCCTCCCCNAACAAAAAAAAAAAAA
AAAAAAAAAAAAGAGAAGACNTGTCGTCTCCCCTCCGCCCGCCACCCACC
TCTCCTCCTAAATAAAAAAAGGCGGCCCCCCCCCCCGCAGGGCGGGAGAC
CCCCCCCCCCCCCCCCCCTCCCCCCNACAAAAAAAAAAAAATAAAAGAGA
AAATACAATCTTCTCATTTCTCCGCCCCCCCTCCCCCCC

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGATCCAGTTACTGGTGGCT
AAGGAGAGATCATAGTCTATAGAGCTTGTCTTGATATAGGGCTTACGAAT
GGATGCCTCAGAATGGAATAACTGGTTAAAAAGATAGAGTTGGGAGTGTA
TTTGGTGTTTAAATGAATTATTCCTAAGCTTGAGTTCCTTATGGAACTGG
GGATCCTCTGTCAGTACACTGTGCACAGACAGCCTTTGGTTTGATAGCCA
GGTTTTCTGGGAGAAAGTATCTCTTTTAGGTATTACAAAATGAAGCCAGG
AATGTGGCTTCATGCAGAACACATAACTTTCAAGTTGACTCAAATCTGTG
ACATTGAACTGTGACATCTCACCTCCCCCACGGGCTGTGTGCATCTTCTA
GGAGGATGTCAGGGGACACACTTCCTCCTCAGATCAGGCTGTCTCAGAAG
GAAAGCTTTACTCCAGGGTGAACTTAATGTGGGGCATGGGTTTGCTGAAG
ATTGAAAGTTTGTCCAGGGACTAGAATGCATACAGCCCATCTTTGGTTCA
CTCTGAATACTCCATCTTTTCTCTCCCCACTCTGTTCTTGGATATGTATA
GATTCTCAGAATTCTCTTTAATGTATGGCTGTGGCCTCCTCTCCTCTGCA
TCCTAATTGTAATGGATGGTTTTTGAATTGCTTCCTCTCTTTTTTTCATT
CATGCGTCATGCCCTTTC

Query= MSMg01no447_g15.g1 MSMg01no447_g15.g1 CHROMAT_FILE:
MSMg01no447_g15.g1 PHD_FILE: MSMg01no447_g15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:18 2005
         (465 letters)



>mm_chr9_29633889_29634754
          Length = 866

 Score =  816 bits (422), Expect = 0.0
 Identities = 455/470 (96%), Gaps = 9/470 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   aagatccagttactggtggctaaggagagatcatagtctatagagcttgtcttgatatag 60
           |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 666 aagacccagttactggtggctaaggagagatcatagtctatagagcttgtcttgatattg 607

                                                                       
Query: 61  ggcttacgaatggatgcctcagaatggaataactggttaaaaagatagagttgggagtgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ggcttacgaatggatgcctcagaatggaataactggttaaaaagatagagttgggagtgt 547

                                                                       
Query: 121 atttggtgtttaaatgaattattcctaagcttgagttccttatggaactggggatcctct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 atttggtgtttaaatgaattattcctaagcttgagttccttatggaactggggatcctct 487

                                                                       
Query: 181 gtcagtacactgtgcacagacagcctttggtttgatagccaggttttctgggagaaagta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gtcagtacactgtgcacagacagcctttggtttgatagccaggttttctgggagaaagta 427

                                                                       
Query: 241 tc---tcttttaggtattacaaaatgaagccaggaatgtggcttcatgcagaacacataa 297
           ||    |    |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tcacagc----aggtattacaaaatgaagccaggaatgtggcttcatgcagaacacataa 371

                                                                       
Query: 298 ctttcaagttgactc--aaatctgtgacattgaactgtgacatctcacctcccccacggg 355
           |||||||||||||||  |||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 370 ctttcaagttgactcaaaaatctgtgacattgaactgtgacatttcacctcccccatggg 311

                                                                       
Query: 356 ctgtgtgcatcttctaggaggatgtcaggggacacacttcctcctcagatcaggctgtct 415
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 310 ctgtgtgcatcttctaggaggatgtcaggggacacacttcctcctcaggtcaggctgtct 251

                                                             
Query: 416 cagaaggaaagctttactccagggtgaacttaatgtggggcatgggtttg 465
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 cagaaggaaagctttactccagggtgaacttaatgtggggcatgggtttg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 866
Length adjustment: 10
Effective length of query: 455
Effective length of database: 856
Effective search space:   389480
Effective search space used:   389480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)