Query= MSMg01no448_m04.b1 MSMg01no448_m04.b1 CHROMAT_FILE:
MSMg01no448_m04.b1 PHD_FILE: MSMg01no448_m04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:08 2005
(483 letters)
>mm_chr9_32321729_32322611
Length = 883
Score = 888 bits (459), Expect = 0.0
Identities = 477/483 (98%)
Strand = Plus / Plus
Query: 1 gaattcagattctgcatgccccacaggagttccagcctctccagcagtagcgagctgctt 60
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattcagattctgcaggggccacaggagttccagcctctccagcagtagcgagctgctt 260
Query: 61 agatgaggttggaagagatttcagggttgccttccctggtagagggggaagagcagggga 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 agatgaggttggaagagatttcagggttgccttccttggtagagggggaagagcagggga 320
Query: 121 acctgagggggcttctgctacacagaggtcttgctggctggttcactagacaaagagccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acctgagggggcttctgctacacagaggtcttgctggctggttcactagacaaagagccc 380
Query: 181 tcagaaagctaccttccaagctctgccacacacagagaaggcagagaggcctggcctctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcagaaagctaccttccaagctctgccacacacagagaaggcagagaggcctggcctctt 440
Query: 241 tctgacagggcctgctgacctggttcctgggaggggcaggagagtggcagacagctgccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctgacagggcctgctgacctggttcctgggaggggcaggagagtggcagacagctgccc 500
Query: 301 tgagatgagagttctgcaggagtcactgtgtagggagtgtgagtctgacaaggacgagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgagatgagagttctgcaggagtcactgtgtagggagtgtgagtctgacaaggacgagct 560
Query: 361 taagagcaagtcttctgtaattaggagttgcgtgcgttaatccaacagcctatacagaga 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 561 taagagcaagtcttctgtaattaggagttgcgtgtgttaatccaacagcctatacagaga 620
Query: 421 ggcctcctggtcacaggcaattccgagatgctgtctactgttgtgctatcagatctggtc 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 621 ggcctcctggtcacaggcaattccgagatgctttctactgttgtgctatcagatctggtc 680
Query: 481 cag 483
|||
Sbjct: 681 cag 683
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space: 412929
Effective search space used: 412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no448_m04.g1 MSMg01no448_m04.g1 CHROMAT_FILE:
MSMg01no448_m04.g1 PHD_FILE: MSMg01no448_m04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:09 2005
(437 letters)
>mm_chr9_32480301_32481137
Length = 837
Score = 814 bits (421), Expect = 0.0
Identities = 430/437 (98%), Gaps = 7/437 (1%)
Strand = Plus / Minus
Query: 1 caacttgcaaagcagtttgcttgctttggaggctgaggtttaaatgccacctgaaagggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 caacttgcaaagcagtttgcttgctttggaggctgaggtttaaatgccacctgaaagggt 765
Query: 61 gaatagagtttgtggaaatctgttttattaagaagcaagagtcttcaaaggccataggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 gaatagagtttgtggaaatctgttttattaagaagcaagagtcttcaaaggccataggta 705
Query: 121 aggcttaataggatgctcaggaataggaagcccatccatattaaaaaacaaaaaacaaaa 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 704 aggcttaataggatgctcaggaataggaagcccatccatatt-------aaaaaacaaaa 652
Query: 181 aacaaacaaacaaaaaaccacagtgatgcagagaagagagagccagccctccagacagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 aacaaacaaacaaaaaaccacagtgatgcagagaagagagagccagccctccagacagtg 592
Query: 241 agatagggcagggtctgaactgaaaggcagaggctatgcacaggggcgagttctgagggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 agatagggcagggtctgaactgaaaggcagaggctatgcacaggggcgagttctgagggc 532
Query: 301 caaaggctgcccagggagaggtgatctctcccatagtgcaattaggcctcctgtttgacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 caaaggctgcccagggagaggtgatctctcccatagtgcaattaggcctcctgtttgacc 472
Query: 361 cctgacttttgccccacaggatatttatggtctctggacaggcagctagggggcaaatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 cctgacttttgccccacaggatatttatggtctctggacaggcagctagggggcaaatga 412
Query: 421 agggatatagactctga 437
|||||||||||||||||
Sbjct: 411 agggatatagactctga 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
