Query= MSMg01no450_i13.b1 MSMg01no450_i13.b1 CHROMAT_FILE:
MSMg01no450_i13.b1 PHD_FILE: MSMg01no450_i13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:29 2005
(190 letters)
>mm_chr9_60677683_60678272
Length = 590
Score = 313 bits (162), Expect = 3e-90
Identities = 183/192 (95%), Gaps = 6/192 (3%)
Strand = Plus / Plus
Query: 1 cacagacaaaatgttcaataatggtcatttctgatagtaggtgtgctagttagctcttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacagacaaaatgttcaataatggtcatttctgatagtaggtgtgctagttagctcttgt 260
Query: 61 tcactgtgataatagccctcaggctgttgacttataaacgttgtatgaccagatacctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcactgtgataatagccctcaggctgttgacttataaacgttgtatgaccagatacctaa 320
Query: 121 ggttatttg--ggc-tcctcacatgctgaagaattttccagcaacctcaattgtgcatcc 177
|| | | ||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggga---gagggcctccccacatgctgaagaattttccagcaacctcaattgtgcatcc 377
Query: 178 tgtgatttaact 189
||||||||||||
Sbjct: 378 tgtgatttaact 389
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 190
Length of database: 590
Length adjustment: 8
Effective length of query: 182
Effective length of database: 582
Effective search space: 105924
Effective search space used: 105924
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no450_i13.g1 MSMg01no450_i13.g1 CHROMAT_FILE:
MSMg01no450_i13.g1 PHD_FILE: MSMg01no450_i13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:30 2005
(226 letters)
>mm_chr9_60853059_60853684
Length = 626
Score = 406 bits (210), Expect = e-118
Identities = 222/226 (98%)
Strand = Plus / Minus
Query: 1 gtctgtgccgttagtttaaatttttatgacacgaggaaatttctttctaccacctccaaa 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 426 gtctgtgccgttagtttaaatttttatgaaacgaggaaatttctttctaccacctccaaa 367
Query: 61 ttcctgggcttaatgaacccagccaggaagaaaatgctctctgctggtctcaggtgggcg 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 366 ttcctgggcttaatgaacccagccaggaagaaaatgttctctgctggtctcaggtgggcg 307
Query: 121 agcgggtaggtgggagaggattgcagtcagtgtaggatctgtcttaccggtgctgaggaa 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 306 agcgggtaggtgggagaggattgcagtcagtgtaggatctgccttaccggtgctgaggaa 247
Query: 181 ggagaaggatttttacctcaaaagccaggtagagagaggaaacact 226
|||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 246 ggagaaggatttttacctcagaagccaggtagagagaggaaacact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 226
Length of database: 626
Length adjustment: 9
Effective length of query: 217
Effective length of database: 617
Effective search space: 133889
Effective search space used: 133889
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
