TTTTTCCCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG
CGCGGAATTCTCACTTTCAGATGTGTCTGGCCTTTGTCCTTCGTCAGCAC
ACCTGTGACACTGAGAAATGTGTTAACCCCCACCCAACAGCTCGGTCCGT
TTCACTTGCTGAGCTACACTGCTCTTTCCAGAGGCTGCCGCTCTTCCTAT
GAGCCCTGCTGGGAGCAGCTGCGCTGGCGGCGGTTCCCAGAGAGGCTGGG
CGGGGCTGGGGCGGGGCTGGGCCCGGGGCCTGGGCGGGGCCGGGGCGGGG
CTGGACAGAAGCTTCCTGAGCCGTTCTGGGAGCAGGATTTCCCCAGAGCT
GCTCCCTCCCTTCCCTTCCCCCTCTCCCTTCTGTTCTTCTTGGCGTCCAT
CGGGTAAACTCTGGCAAACTCTTCTGGGCAGCCCTGCCTTTTAAAGGAGT
ATATGGACTGATCTTTCTTCACAGTGATTTTTAAGGGTTCTGTGAGCTCT
TTATCTGATGTATTCGTGGACACCAGCTGACTGTCCTTCAGGGTCTGTCA
TGCATTATCTCAGCTCTTGCACAGCTTTGTGATGAGCTTGGATCTAGAGC
TTAAGGCTGGCTAGACTGGACTGTTCATAGTGGTGGCTGTGGCCCTCCCA
TCCGCCCTAGGCCGGTGTCTACTTACCAGCCTGTTCCCCATCTCAAAAGC
GGTCATGATGGTGACATCCTTGGAGATCCCTTGGCATCTGTTAAGTGCCT
GTCACTG

NNCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGTCCTGACCTCCTTTGGTGA
TGAACAGCAATGTGGATGTGTAAGCTGAATAAATCCTTTCCTTCCTAACT
TGCTTCTTGGTCATGATATCTGTACAAGAATAGAAACCCTGACCGGGGGG
GGGGGGTGAGTATGGGGGACTTTTGGGATAGCATTGGGAAATGTAAATGA
GGAGAAATACCTAATAAAAAAAAAAGAAAAAATCACAATAAAATATGTGC
AAAACTATTTAAAAATAAATTTTTTTATAGAAAGAAAGATAGAAAGAAAG
AAAGAAAGAAATATTTATAGAAAGAAAGAATGAAACCCTGACTAAGACAG
GCAGTGAGGGTCATGAGTTTATCTCATGTAAGGGGCTTTAAATGAGTCAA
AAAATATTTTATTGGATGGAGTGTTGTGATTTACTCGGAGCAAACGTGTT
TGTGTTATATCTTTTTGAAGGCCCTCCTTGTTTTAATTTTATTTATGTCG
ACGTATTTCCTACTCCGATTTAACTTTATAATATACCTTTTTCATCTTCC
CCCCTCTATTGGCCTCACCAATACCTTTCCTCTCCTGCCTTTAATATAGT
TTTTCCTAATTACTTTGTGTTTTAATCTTCCTTACCCTTGTTATTTTTTG
TCACCCCCCGTGGGCTTCCTTGTGTAAAATATGTTCTATAGTCACTAACA
AGTCTATGAATTATATTCGCTTTCTTTTCATAATACATCCCN

Query= MSMg01no451_b10.b1 MSMg01no451_b10.b1 CHROMAT_FILE:
MSMg01no451_b10.b1 PHD_FILE: MSMg01no451_b10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:13 2005
         (645 letters)



>mm_chr9_121280432_121281476
          Length = 1045

 Score = 1040 bits (538), Expect = 0.0
 Identities = 628/686 (91%), Gaps = 46/686 (6%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcactttcagatgtgtctggcctttgtccttcgtcagcacacctgtgacactga 64
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gaattctcacttgcagatgtgtctggcctttgtccttcgtcagcacacctgtgacactga 218

                                                                       
Query: 65  gaaatgtgttaacccccacccaacagctcggtccgtttcacttgctgagctacactgctc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gaaatgtgttaacccccacccaacagctcggtccgtttcacttgctgagctacactgctc 278

                                                                       
Query: 125 tttccagaggctgccgctcttcctatgagccctgctgggagcagctgcgctggcggcggt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tttccagaggctgccgctcttcctatgagccctgctgggagcagctgcgctggcggcggt 338

                                                                       
Query: 185 tcccagagaggctgggcggggctggggcggggctgggcccggggcctgggcggggccggg 244
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 339 tcccagagaggctgggcggggccggggcggggctgggcccggggcctgggcggggccggg 398

                                                                       
Query: 245 gcggggctggacagaagcttcctgagccgttctgggagcaggatttccccagagctgctc 304
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 399 gcggggctggacagaagcttcctgagctgttctgggagcaggatttccccagagcggctc 458

                                                                       
Query: 305 cctcccttcccttccccctctcccttctgttcttcttggcgtccatcgggtaaactctgg 364
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 459 cctcccttcccttccccctctcccttctgttctccttggcgtccatcgggtaaactctgg 518

                                                                       
Query: 365 caaactcttctgggcagccctgccttttaaaggagtatatggactgatctttcttcacag 424
           |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 519 caaactcttctgggtagccccgccttttaaaggagtatatggactgatctttcttcacag 578

                                                                       
Query: 425 tgatttttaagggttctgtgagctctttatctgatgtattcgtggacaccagctgactgt 484
           ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 579 tgatttttaagggttctgtgagctctttatctgatgtatgcgtggacaccggctgactgt 638

                                                                       
Query: 485 ccttcagggt-ctg------tcatgcattatctcagctc--------------------- 516
           ||||| |||| |||      || ||||||||||||||||                     
Sbjct: 639 ccttctgggttctgggtccgtcctgcattatctcagctcctgctggggcaggcgtagtct 698

                                                                       
Query: 517 ---tt---------------gcacagctttgtgatgagcttggatctagagcttaaggct 558
              ||               ||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 gcgttcccaagggaggggctgcacagctttgtgatgagcttggatctagagcttaaggct 758

                                                                       
Query: 559 ggctagactggactgttcatagtggtggctgtggccctcccatccgccctaggccggtgt 618
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 ggctagtctggactgttcatagtggtggctgtggccctcccatccgccctaggccggtgt 818

                                     
Query: 619 ctacttaccagcctgttccccatctc 644
           ||||||||||||||||||||||||||
Sbjct: 819 ctacttaccagcctgttccccatctc 844


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space:   657225
Effective search space used:   657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)