TTTTATTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCCCACCTTGCATGAAGCAGCAGCAGCAGTTACCATGAGA
GCCATGTGAACCACAATGTAATACAGGCAAAAATGGCCAAATCTGTTAAT
AAAATCATAGGTTCCGAAGATCTAATTATGTCATCTCTCCTTCCTATGCA
CTCTTACTCCTGCTATCTAGAATGCTCTCTTGAGGTCACAAAAGGTTCAT
CTTAAGTAAGTACTAATTATTTTTAGCCTAGCTTAGACTTAGGGCTAGTC
TCCCCAACCCAGAGAGATCTGAGGAGAGCCTGCTATGAATTACACTGTGA
CCATTTAAAGAAAGTCTAAACTGGGACAGTGCAGCTAAGCATGTAAGGCA
CTGTGTGTAAAACTTAGCATTGTCTGTGAACTAACTAAATGAGTTCTTTT
AAAAGTTCCAAGCTCAGGAGCAGAGTGGGTGGCTAATTCCCTGACTCACC
TATTCAACTCATTTGCCGTCCTGACAAAATACTCCCTCCTCTAGGACACA
CTAGCTGGCTTTATTCTGAAGCTGTTCTGTTTCTTCACAGGGTAGACAGG
AATTCGCAAAGTAATAGCTTTCTCCTTTGTGTGGGATATCGTTTATGAAG
CAGGGCTCAGTTCTTTGTTCAGGAGGAATTGTGGGAATGTCAGATCATTT
TTGAACATAATTGGATATACAGATAAATACTT

TTTATTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAACAAAGTAGAAAGATGC
AAAATGAATGCACAAACATTGGATGCATTTTAATAAGTCAACAATAAAAA
TCTAAAAGGGAAATTATAAAAAGTAATTCTATCTACAATAGCAGAAAAAG
AAAAAATACTTAGGTGTAAATCAAGGTGACAAGATTAAGATTATAAAATG
GTGAAACAAATGAAAATTAGAAATAAATGGAAACATTTCCATGGTCATAA
AATGTTCTAGTATTTAATATTGTTACAATATCAATACTACCCAATTTGAT
GTTTATCAAAACCTGAAATTACTATTTTGTTTGCAAAAATAGGAAATTCA
TATGGAGTCTCAATGGGCCTCCTCAACCTTCCATAGCTAAAATTTTCTTG
AGAAAAAGAAAGAGAACAAAATAAGATTCAAGCTTCCATGTTTGTAAAAC
TTACAAAACAAAGCAAAGCAAAACAAAACAAAACAAAACAAAACAAAACC
TTTCAATAATGGCTTGAACAACTTTAGTAATGGTTGGGGAGCATGAGGTT
AGAGTTTCATTCTCAGAGCCATGTTAAAAAGACATCTGGGAGTCTGGCAG
TGGTGGCGCACGCCTTTAATCCTAGTACTTGGGAGACAGAGGCAGGCGGA
TTTCTGAGTTCTAGGCCAGCCTGGTCTACAAAGN

Query= MSMg01no451_h04.b1 MSMg01no451_h04.b1 CHROMAT_FILE:
MSMg01no451_h04.b1 PHD_FILE: MSMg01no451_h04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:42 2005
         (583 letters)



>mm_chr9_94752514_94753496
          Length = 983

 Score = 1112 bits (575), Expect = 0.0
 Identities = 581/583 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgaagcagcagcagcagttaccatgagagccatgtgaaccacaatgtaatacaggcaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaagcagcagcagcagttaccatgagagccatgtgaaccacaatgtaatacaggcaaaa 260

                                                                       
Query: 61  atggccaaatctgttaataaaatcataggttccgaagatctaattatgtcatctctcctt 120
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggccaaatccgttaataaaatcataggttccgaagatctaattatgtcatctctcctt 320

                                                                       
Query: 121 cctatgcactcttactcctgctatctagaatgctctcttgaggtcacaaaaggttcatct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctatgcactcttactcctgctatctagaatgctctcttgaggtcacaaaaggttcatct 380

                                                                       
Query: 181 taagtaagtactaattatttttagcctagcttagacttagggctagtctccccaacccag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taagtaagtactaattatttttagcctagcttagacttagggctagtctccccaacccag 440

                                                                       
Query: 241 agagatctgaggagagcctgctatgaattacactgtgaccatttaaagaaagtctaaact 300
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 agagatctgaggagagcctgctatgaattacactgtgaccatttcaagaaagtctaaact 500

                                                                       
Query: 301 gggacagtgcagctaagcatgtaaggcactgtgtgtaaaacttagcattgtctgtgaact 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggacagtgcagctaagcatgtaaggcactgtgtgtaaaacttagcattgtctgtgaact 560

                                                                       
Query: 361 aactaaatgagttcttttaaaagttccaagctcaggagcagagtgggtggctaattccct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aactaaatgagttcttttaaaagttccaagctcaggagcagagtgggtggctaattccct 620

                                                                       
Query: 421 gactcacctattcaactcatttgccgtcctgacaaaatactccctcctctaggacacact 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gactcacctattcaactcatttgccgtcctgacaaaatactccctcctctaggacacact 680

                                                                       
Query: 481 agctggctttattctgaagctgttctgtttcttcacagggtagacaggaattcgcaaagt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agctggctttattctgaagctgttctgtttcttcacagggtagacaggaattcgcaaagt 740

                                                      
Query: 541 aatagctttctcctttgtgtgggatatcgtttatgaagcaggg 583
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aatagctttctcctttgtgtgggatatcgtttatgaagcaggg 783


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space:   557529
Effective search space used:   557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)