Query= MSMg01no451_l12.b1 MSMg01no451_l12.b1 CHROMAT_FILE:
MSMg01no451_l12.b1 PHD_FILE: MSMg01no451_l12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:04 2005
(668 letters)
>mm_chr9_71680975_71682042
Length = 1068
Score = 1226 bits (634), Expect = 0.0
Identities = 658/666 (98%), Gaps = 1/666 (0%)
Strand = Plus / Plus
Query: 4 ggaattcacttgtaactgaggatgatcttgaatttctgatggctctaccccttcctcttt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattcacttgtaactgaggatgatcttgaatttctgatggctctaccccttcctcttt 262
Query: 64 tttttaaaaaatctttttaaataaagatttattatttattttatgtatctgagtacacca 123
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ttttaaaaaaatctttttaaataaagatttattatttattttatgtatctgagtacacca 322
Query: 124 ttgctctcttcagacacaccagaag-agggcatcagctcccatcacagatggttgtgagt 182
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 323 ttgctctcttcagacacaccagaagaagggcatcagctcccattacagatggttgtgagt 382
Query: 183 caccatgtggttgctgggaattgaactcaggacctctgggagaacagtcagtgctcttaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 caccatgtggttgctgggaattgaactcaggacctctgggagaacagtcagtgctcttaa 442
Query: 243 cgactgaaccatctctccagccccctacccctccctcttgagcgatgaaattatgggtgc 302
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 443 cgactgagccatctctccagccccctacccctccctcttgagtgatgaaattatgggtgc 502
Query: 303 ataccatcacccctggttttatgtggcactggggatggaagccagggtttctgttttgct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ataccatcacccctggttttatgtggcactggggatggaagccagggtttctgttttgct 562
Query: 363 agacaagcactctaccaactgaactcttgacattcattcattttaatagtagtttttggt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 agacaagcactctaccaactgaactcttgacattcattcattttaatagtagtttttggt 622
Query: 423 tgctgtattgagcataggcaatgaggaagagggtggttaaagccagcttagcaaagcaat 482
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tgctgtattgagcataggcaacgaggaagagggtggttaaagccagcttagcaaagcaat 682
Query: 483 gtgatcaaatgttgggctggatgtttctggggcatattatgggatggtgatggctgtaga 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gtgatcaaatgttgggctggatgtttctggggcatattatgggatggtgatggctgtaga 742
Query: 543 gtaatagtagattgctttcccataaggtaggtaggctttagctgaccagtttattgcctg 602
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 743 gtaatagtagattgctttcccataaggtaggtaggctttagctgaacagtttattgcctg 802
Query: 603 gattgaacaaaacctgaccctcctcctgccagcaagatggaagtctataagtctacatga 662
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gatagaacaaaacctgaccctcctcctgccagcaagatggaagtctataagtctacatga 862
Query: 663 tgggcc 668
||||||
Sbjct: 863 tgggcc 868
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no451_l12.g1 MSMg01no451_l12.g1 CHROMAT_FILE:
MSMg01no451_l12.g1 PHD_FILE: MSMg01no451_l12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:04 2005
(639 letters)
>mm_chr9_71841735_71842773
Length = 1039
Score = 1228 bits (635), Expect = 0.0
Identities = 638/639 (99%)
Strand = Plus / Minus
Query: 1 ttttttcagttagatttgtattttgtcagatacatcccatattactgaagccatgagctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 839 ttttttcagttagatttgtattttgtcagatacatcccatattactgaagccatgagctt 780
Query: 61 gatctaatctctggcatacatctatcctgcctccctaacaagcacacttgcacacacaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 gatctaatctctggcatacatctatcctgcctccctaacaagcacacttgcacacacaga 720
Query: 121 cacaagtagcacagtcatgcaaaagtaaattttaactgaccatagctaatactaagtgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 cacaagtagcacagtcatgcaaaagtaaattttaactgaccatagctaatactaagtgag 660
Query: 181 agatgaggtttgacgattaagtcagatggaggtaaagaattttctcccttcctttaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 agatgaggtttgacgattaagtcagatggaggtaaagaattttctcccttcctttaaaat 600
Query: 241 gctagtcgcagttagaaagttcttaagcagttttcaggtttttaccagctataggaagtt 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 599 gctagtcgcagttagaaagttcttaagcagttttcaggtttttaccagctgtaggaagtt 540
Query: 301 ggcagttggctctgaagaagagcataaaggtttaggtgaagctgtttgggtccccagggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ggcagttggctctgaagaagagcataaaggtttaggtgaagctgtttgggtccccagggt 480
Query: 361 taggtgctttaggcaaatagctccctggagagagtgagtcctagcttagagccctctgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 taggtgctttaggcaaatagctccctggagagagtgagtcctagcttagagccctctgag 420
Query: 421 gtaaccagagggaaaaatagggcatgggttctgaggaattaaattgagaaaaacatcagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gtaaccagagggaaaaatagggcatgggttctgaggaattaaattgagaaaaacatcagt 360
Query: 481 aagttaatgcataacttttcttgaatttttaaaattctgctgggtttgtcaaaattgcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 aagttaatgcataacttttcttgaatttttaaaattctgctgggtttgtcaaaattgcct 300
Query: 541 tgaatttgattagaagtaccggatgtatacttgaaatgtatacaaagagccagtaataaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tgaatttgattagaagtaccggatgtatacttgaaatgtatacaaagagccagtaataaa 240
Query: 601 taaaaatgagccactatgccatcaaattttttgtttaga 639
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 taaaaatgagccactatgccatcaaattttttgtttaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
