NNNCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAGGATCTTCTATATGATTTAAGTTTCCATTTTGAAAAACT
TACAATAAGAAAGTTTTATTATCATAATCAACATTTTAAAATGTATATTG
TTGAATTGTCTTCCAGAGGGCCTAATACATAAGTAAATCCTCAGTAACCT
ATATTAGAAAGGCTACATACAAATAAATCAAAGTCCAACCAATCTTGTCT
TAAGGTAGCAATTTCCAAATGAGTTTGTGACCTAAAAAAGCAAATTATTA
GCATCTTCAAAATAAGTGACACAGACCCAGACACACAGCAAATGGTTGCC
TTTAAAATGAATATCCAAGAAAAGATAAGAACTGTTCCTATCACAAAGAA
GTCTATATTCAAAAGTTTTCTGTCTTTGTGCTAAAAGAGGCATGTTCAAC
AAACCTAAGTAAATTTCCAGAAAGTCTTTTTAAAAACAGGTTTTTTAATA
ATACAGTGTAGTTAACTCCAGGTGATATCTAGACTTTGGTACAAAATATG
AAAACGAATACAACGAAAAGAAGCAAGGAGGGGGAGGGAGAGGAGAGAAA
GCCTTCCTAGTTCATTGCTCTCAATGAGAACAGGGGGACAGTTATTAAAA
TGATGGCTATTGAAAAGCCAGCCTGAGATAATCTATTTGAGGGGTGATTG
AGGGGAAATGTCATTACAAACCCTGTAGCGCTAAAAAGACTAAAGTAACA
GATACAAATGCN

TGGGATGCTGGGGGCGCTGTTCAAGAATTGAGTGGCCTATAGATGTGCGA
GAAGAATCGGTAGTTTTCACCCACAAAGCTGGAGGCCCCACTGGTCTCCC
GGGTTAACANATNTTGAAAAATTTTCTCCTAATGCCCNTAAAAAAATAAT
CTGCCCCGGGAAAGGTGGGGCAAAAAACACAAAAAAAAGGTGTCCCCCCC
TCCTGCCCCTTTATAANGGCGCCCCCCAGAGAGGGGCCNACAAAAAAGGG
GGGTTCTCCCCCCCAAAAAAAAGGGGGAAAAAAAAGTGTTTTTTCTTTTT
AAGTTTTTATAAAAAAAACACCCCCGCGGGGCCCAAAATATTTCCCCCCC
CGGCGCGGGCTTTTAAAAACACCCACCGCCCCCCCCCCCCCGGAGAGGAT
ATCCCCCCCCCCGCCTTTTTTCCAAAAAAGAAAGAGGGGTTGTTTTTTTT
TTTTTATTAAAAAAAAAAAAAAACAATTCCCCCCCTCCCCCTCTCTATAT
GAGAAAAAAAAACAACGCGGGGANNNNATCCGTAGTGAGAAAGAAAAAAA
AAAAAAAAAAAATGGAAGCCCCTCTTCTTTTTTTTTCTCTTTGTGAAAAA
AAAAAAAAAAAAAAAAAAAANATTTTTTTTTTTTTCTTCCTTCTCTCCCT
CCTCNTTTTCTTTTTTTGTTTTTCTTTTTTTNNTNNNTCNTTTNNNNNTT
TTTTNNTTTTTTTTTNTTNTTATTTAAAATTAATTAACAAATACTTCTCC
CTCTCTCCCNCCCCCTTNCTTTACTTCTCATTATTTNANCATCCTCCNCC
CCACAACAACACCTAACACNCCCANACCAAAAAAAAAATACTATTCCCAA
TTCGGTTGACGTTGTGATGAGT

Query= MSMg01no451_n10.b1 MSMg01no451_n10.b1 CHROMAT_FILE:
MSMg01no451_n10.b1 PHD_FILE: MSMg01no451_n10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:14 2005
         (697 letters)



>mm_chr9_115176581_115177677
          Length = 1097

 Score = 1324 bits (685), Expect = 0.0
 Identities = 691/693 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaggatcttctatatgatttaagtttccattttgaaaaacttacaataagaaagt 64
           |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggatcatatatatgatttaagtttccattttgaaaaacttacaataagaaagt 264

                                                                       
Query: 65  tttattatcataatcaacattttaaaatgtatattgttgaattgtcttccagagggccta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttattatcataatcaacattttaaaatgtatattgttgaattgtcttccagagggccta 324

                                                                       
Query: 125 atacataagtaaatcctcagtaacctatattagaaaggctacatacaaataaatcaaagt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atacataagtaaatcctcagtaacctatattagaaaggctacatacaaataaatcaaagt 384

                                                                       
Query: 185 ccaaccaatcttgtcttaaggtagcaatttccaaatgagtttgtgacctaaaaaagcaaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccaaccaatcttgtcttaaggtagcaatttccaaatgagtttgtgacctaaaaaagcaaa 444

                                                                       
Query: 245 ttattagcatcttcaaaataagtgacacagacccagacacacagcaaatggttgccttta 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttattagcatcttcaaaataagtgacacagacccagacacacagcaaatggttgccttta 504

                                                                       
Query: 305 aaatgaatatccaagaaaagataagaactgttcctatcacaaagaagtctatattcaaaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaatgaatatccaagaaaagataagaactgttcctatcacaaagaagtctatattcaaaa 564

                                                                       
Query: 365 gttttctgtctttgtgctaaaagaggcatgttcaacaaacctaagtaaatttccagaaag 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gttttctgtctttgtgctaaaagaggcatgttcaacaaacctaagtaaatttccagaaag 624

                                                                       
Query: 425 tctttttaaaaacaggttttttaataatacagtgtagttaactccaggtgatatctagac 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tctttttaaaaacaggttttttaataatacagtgtagttaactccaggtgatatctagac 684

                                                                       
Query: 485 tttggtacaaaatatgaaaacgaatacaacgaaaagaagcaaggagggggagggagagga 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tttggtacaaaatatgaaaacgaatacaacgaaaagaagcaaggagggggagggagagga 744

                                                                       
Query: 545 gagaaagccttcctagttcattgctctcaatgagaacagggggacagttattaaaatgat 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gagaaagccttcctagttcattgctctcaatgagaacagggggacagttattaaaatgat 804

                                                                       
Query: 605 ggctattgaaaagccagcctgagataatctatttgaggggtgattgaggggaaatgtcat 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ggctattgaaaagccagcctgagataatctatttgaggggtgattgaggggaaatgtcat 864

                                            
Query: 665 tacaaaccctgtagcgctaaaaagactaaagta 697
           |||||||||||||||||||||||||||||||||
Sbjct: 865 tacaaaccctgtagcgctaaaaagactaaagta 897


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 697
Length of database: 1097
Length adjustment: 10
Effective length of query: 687
Effective length of database: 1087
Effective search space:   746769
Effective search space used:   746769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)