Query= MSMg01no452_k15.b1 MSMg01no452_k15.b1 CHROMAT_FILE:
MSMg01no452_k15.b1 PHD_FILE: MSMg01no452_k15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:17 2005
(693 letters)
>mm_chr9_74565451_74566543
Length = 1093
Score = 1239 bits (641), Expect = 0.0
Identities = 677/689 (98%), Gaps = 1/689 (0%)
Strand = Plus / Plus
Query: 5 gaattccacacattcaccaaagctaagcctcatggtgctgtgtccccagtgttgggaacc 64
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattccacacac-cagcaaagctaagcctcatggtgctgtgtccccagtgttgggaacc 264
Query: 65 atacctgtcatagcagagccaccaataaatatctgttgaatgagaaatgatgcaatgcgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 265 atacctgtcatagcagagccaccaataaatatctgttgaatgagaaatgatgcaatgtgt 324
Query: 125 gaatgagaggaaagaatgtcctgtttctgatgaacttcttcaaaccaaatctgcctaaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaatgagaggaaagaatgtcctgtttctgatgaacttcttcaaaccaaatctgcctaaca 384
Query: 185 gcacatcacaagtataacattttgacagacccctccagacccagttggtatcatctgctt 244
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcacatcacgagtatgacattttgacagacccctccagacccagttggtatcatctgctt 444
Query: 245 gtaaatgtcttcctgggtttcctcctggctggttcctcatcatcagatttcagtgaatta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtaaatgtcttcctgggtttcctcctggctggttcctcatcatcagatttcagtgaatta 504
Query: 305 ctacatcctcagaggagccaccaatgatcactcctccgtgtcggagggaaagatactatc 364
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 505 ctacatcctcagaggagccaccaatgatcactcttccgtgtcagagggaaagatactatc 564
Query: 365 tcatgaggggacataagatgcctcctttatcttctccagggagattattactatcataaa 424
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 565 tcatgaggggacataagatgcctcctttatcttctccagggagattattactctcataaa 624
Query: 425 atacatttacatcatatgttcatttttgatgactgccttgacaaataccataaacttagt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atacatttacatcatatgttcatttttgatgactgccttgacaaataccataaacttagt 684
Query: 485 ggcttgaatataacatgggtcttaccttagttttgtagttcagaagtttgactcaagtct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggcttgaatataacatgggtcttaccttagttttgtagttcagaagtttgactcaagtct 744
Query: 545 aactataatcaagtcagagtgtccatgaggctcagaccctttctggggactctcctggag 604
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 745 aactataatcaagttagagtgtccatgaggctcagaccctttctggagactctcctggag 804
Query: 605 acttcatttcagaaccttctgtatcttctaggacccatcacagtgtttggcatgtgaccc 664
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 acttcatttcagaaccttttgtatcttctaggacccatcacagtgtttggcatgtgaccc 864
Query: 665 gtgcttctagcttcaaaaatgaatggtat 693
|||||||||||||||||||||||||||||
Sbjct: 865 gtgcttctagcttcaaaaatgaatggtat 893
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1093
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1083
Effective search space: 739689
Effective search space used: 739689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_k15.g1 MSMg01no452_k15.g1 CHROMAT_FILE:
MSMg01no452_k15.g1 PHD_FILE: MSMg01no452_k15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:17 2005
(184 letters)
>mm_chr9_74731452_74732036
Length = 585
Score = 342 bits (177), Expect = 6e-99
Identities = 183/185 (98%), Gaps = 1/185 (0%)
Strand = Plus / Minus
Query: 1 acttgggaggctggtttatggggatagttgaaggaggcaaacctgggctacattacaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 acttgggaggctggtttatggggatagttgaaggaggcaaacctgggctacattacaaga 398
Query: 61 tccagtctcaatccactctccatccaccaccaaaaggaaatggactcctcaagaggtgtg 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tccagtctcaacccactctccatccaccaccaaaaggaaatggactcctcaagaggtgtg 338
Query: 121 ggttgaactgtgtggtcatctcttggtgcagttgggcagaccctctgtt-cacatctgtt 179
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 337 ggttgaactgtgtggtcatctcttggtgcagttgggcagaccctctgttccacatctgtt 278
Query: 180 tgtct 184
|||||
Sbjct: 277 tgtct 273
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 585
Length adjustment: 8
Effective length of query: 176
Effective length of database: 577
Effective search space: 101552
Effective search space used: 101552
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
