Query= MSMg01no453_d15.b1 MSMg01no453_d15.b1 CHROMAT_FILE:
MSMg01no453_d15.b1 PHD_FILE: MSMg01no453_d15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:01 2005
(664 letters)
>mm_chr9_85378921_85379984
Length = 1064
Score = 669 bits (346), Expect = 0.0
Identities = 364/370 (98%)
Strand = Plus / Minus
Query: 295 gtatattatttggaatattagatcatcacagtggtggggaagggatggctctgaaggggg 354
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1064 gtatattatttggattattagatcatcacagtggtggggaagggatggctctgaaggggg 1005
Query: 355 ctaaagaaagataaattgtgattatgtcccagacttacaacatcccaacctgtccaccat 414
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1004 ctaaagaaagataaattgtgattatgtcccggacttacaacatcccaacctgtccaccat 945
Query: 415 ccctgaagttctaatcagttaacattgcagaaggttcactgtaaggtacagttcctctcc 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 ccctgaagttctaatcagttaacattgcagaaggttcactgtaaggtacagttcctctcc 885
Query: 475 taaaagagcttttgctcacactgatgcccaaccagctgcaacatttcaaaccgtcatccc 534
||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 taacagagcttttgctcacgctgatgcccaaccagctgcaacatttcaaaccgtcatccc 825
Query: 535 attgtggataaccacctcatggaaactgtatcacatagtccccacttcaattaacccgtg 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 824 attgtggataaccacctcatggaaactgtatcacatagtccccacttcaattaacccatg 765
Query: 595 gcttcatttgtattctaacacttgtttagatcatctatatcagagggagggggcagagaa 654
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 764 gcttcatttgtattctaacacttgtctagatcatctatatcagagggagggggcagagaa 705
Query: 655 caatgggtag 664
||||||||||
Sbjct: 704 caatgggtag 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_d15.g1 MSMg01no453_d15.g1 CHROMAT_FILE:
MSMg01no453_d15.g1 PHD_FILE: MSMg01no453_d15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:01 2005
(668 letters)
>mm_chr9_85191803_85192870
Length = 1068
Score = 1247 bits (645), Expect = 0.0
Identities = 663/669 (99%), Gaps = 1/669 (0%)
Strand = Plus / Plus
Query: 1 cccatagacttgtctgcagatcagactgatggaagcttgtctgcagatcaggctgatgga 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cccatagacttgtctgaagatcagactgatggaagcttgtctgcagatcaggctgatgga 259
Query: 61 ggcagttcctcagttgagaatccctcttcataggtgtcttagctacttttaaatctctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ggcagttcctcagttgagaatccctcttcataggtgtcttagctacttttaaatctctgt 319
Query: 121 gacaaagtaccatgaccaaggcaacttataaaaaaa-gtgtttaattaggactaaggttt 179
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 320 gacaaagtaccatgaccaaggcaacttataaaaaaaagtgtttaattaggactaaggttt 379
Query: 180 cagatggtcagagtccacaatgatggagcaaagacctggtggcaagaacagctgagacac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cagatggtcagagtccacaatgatggagcaaagacctggtggcaagaacagctgagacac 439
Query: 240 tcacatcttgatcctcaagcaggaggccgagagggaatgctggtgttggctcaagccttt 299
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 440 tcacatcttgatcctcaagcaggaggccgagagggaatgctggcattggctcaagccttt 499
Query: 300 tgaaacctcaaaacccaacccagtgacacatcccctctgacaagccatattcactaatcc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgaaacctcaaaacccaacccagtgacacatcccctctgacaagccatattcactaatcc 559
Query: 360 ttctcatgaggtcatgatccttccagcatgggaacaagctcctgggtgttgagaaatcac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttctcatgaggtcatgatccttccagcatgggaacaagctcctgggtgttgagaaatcac 619
Query: 420 atgaaccagaggtggtagaatcagactagtgatcccaaccaagaccctagaaacataaca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atgaaccagaggtggtagaatcagactagtgatcccaaccaagaccctagaaacataaca 679
Query: 480 agctcagctgttgactcatcactgacagaccatataccaactctgtctagaccagcagga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agctcagctgttgactcatcactgacagaccatataccaactctgtctagaccagcagga 739
Query: 540 ctcatgggctcatagatcaaagagaaatgtgaaatgattatggctggaagttaagactta 599
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ctcatgggctcatagatcaatgagaaatgtgaaatgattatggctggaagttaagactta 799
Query: 600 tggtggtgagcctcagacacatggggaccctaaagactacagaggctattcaagttgccc 659
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tggtggtgagcctcagatacatggggaccctaaagactacagaggctattcaagttgccc 859
Query: 660 tgatgatga 668
|||||||||
Sbjct: 860 tgatgatga 868
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
