NCCTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTAATCTACCTCAGTTAGGGAGGCCACCGGTCCATTTGCTACA
TTAGTAACAAAGGTTCCAGTTACAGGACACTACCCCAGAAGCAACTGGAG
GACTTCTACAATATACCATATATTCACAGTATGCTCTTTCTAAAAACAAA
ATTAAAAACCCAGGTGTGGTCTTAGATTCTTTAAAAACTTGAGAAAACTT
GACAAAAATTGTTTTACTTTCTTTTTCCATATTGCTGCTTTCCATGTAGA
GGCAAAAACAAACAAACAAACAAACAAACAAAACCAACAAAAATAGGTCC
AGTCTGCTGAGCACCGAGGGATCCTCGTCCTCCTGCGTCTGCACGGCTGT
CCCTGTGGAAAGTGTTGTCAAAGCATCATGGGATCACAGAACAGACATGG
AGTCGGCAGGTGAACCTGCTCGCGGATGTATCAGTCACAGCTCTCACCAG
CTCGGGCTGTATTTCACATGATAATATTTTCCTGGCCGTTTAGCACCTAA
TAAATCATATATTTATGGAAACAAAAATGAAGTCATCTTCGTAAAAAGGC
TTTCCTCGCTCTCAGATCATAACAGATTGCCCCGTCCCCCGCCCTGCTTT
TCCCCCATGCCTTTACCGAAACCTTTTGTCCTATTTATGACCCACCTGGA
AATCCTTTTGGCATAAAGAGAAGN

NNNGCATGACANNGNNANCCGGNCGNCCGCCTGTTTCCCNACTTTANNNG
ACCTATANAATTTATCCGCGNAATTCAAAACACGNNACAGGNAACCTTTC
TGNNTTATTTCTCATGGCCAATCTGACTATCTCACCACGGAAGNACACCT
CTAGGNTAGNGNTTGCAAAAAGGNTAAACTGAAAAGGNAGAATNTCCCTA
AATGGGANGNNCTCCCCATCACANNNCTGNNNCCCTGGACTAANNAAAAN
CAAANNNGNNNGNNCANNNANCNCNGCCNCCCGANNGNNNNCNNNACANG
NNCNNNNGCCCCNGCCCCCNNGNCCCCCCCGCGAGGGGGAGGGTCAGTTT
TNNNCAACTACCCCGGCCCCNTTTTGGGGGGTGCTGTGTGTGTGGTTGTT
GGTTTTTGTGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTAATTTAAACGGAAAAAAAATAACAAAANNNNNNNNNAAACCNN
CCCCCCCCCCCCNCCCCCCNCNCCNCCCCCCCCCCCNNCCCCCCCCCCCC
CACNNNCCNCCCCCNCCCCCCCCCCCCNNNNNNANCCCCCCCNCCCNNCC
CNNNNCCCCCCCCCCACCCCCCCCCCACCACCACCCCCCCCNACCCCCCC
CCCCCNCCCCCCCCNCCCCACCCACCCCCCCCCCCCCCACCCNNANAACC
CCCACCCCCCCCCCCCCCCAAACCCCCACCCCCCCACCCCCCNCCCCCCC
CCCCCCCCCACAAAGCCAGCTG

Query= MSMg01no455_b24.b1 MSMg01no455_b24.b1 CHROMAT_FILE:
MSMg01no455_b24.b1 PHD_FILE: MSMg01no455_b24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:32 2005
         (572 letters)



>mm_chr9_48001413_48002384
          Length = 972

 Score = 1091 bits (564), Expect = 0.0
 Identities = 567/568 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttaatctacctcagttagggaggccaccggtccatttgctacattagtaacaaa 64
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttaatccacctcagttagggaggccaccggtccatttgctacattagtaacaaa 264

                                                                       
Query: 65  ggttccagttacaggacactaccccagaagcaactggaggacttctacaatataccatat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggttccagttacaggacactaccccagaagcaactggaggacttctacaatataccatat 324

                                                                       
Query: 125 attcacagtatgctctttctaaaaacaaaattaaaaacccaggtgtggtcttagattctt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attcacagtatgctctttctaaaaacaaaattaaaaacccaggtgtggtcttagattctt 384

                                                                       
Query: 185 taaaaacttgagaaaacttgacaaaaattgttttactttctttttccatattgctgcttt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taaaaacttgagaaaacttgacaaaaattgttttactttctttttccatattgctgcttt 444

                                                                       
Query: 245 ccatgtagaggcaaaaacaaacaaacaaacaaacaaacaaaaccaacaaaaataggtcca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccatgtagaggcaaaaacaaacaaacaaacaaacaaacaaaaccaacaaaaataggtcca 504

                                                                       
Query: 305 gtctgctgagcaccgagggatcctcgtcctcctgcgtctgcacggctgtccctgtggaaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtctgctgagcaccgagggatcctcgtcctcctgcgtctgcacggctgtccctgtggaaa 564

                                                                       
Query: 365 gtgttgtcaaagcatcatgggatcacagaacagacatggagtcggcaggtgaacctgctc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtgttgtcaaagcatcatgggatcacagaacagacatggagtcggcaggtgaacctgctc 624

                                                                       
Query: 425 gcggatgtatcagtcacagctctcaccagctcgggctgtatttcacatgataatattttc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gcggatgtatcagtcacagctctcaccagctcgggctgtatttcacatgataatattttc 684

                                                                       
Query: 485 ctggccgtttagcacctaataaatcatatatttatggaaacaaaaatgaagtcatcttcg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctggccgtttagcacctaataaatcatatatttatggaaacaaaaatgaagtcatcttcg 744

                                       
Query: 545 taaaaaggctttcctcgctctcagatca 572
           ||||||||||||||||||||||||||||
Sbjct: 745 taaaaaggctttcctcgctctcagatca 772


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space:   540644
Effective search space used:   540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)