Query= MSMg01no455_d22.b1 MSMg01no455_d22.b1 CHROMAT_FILE:
MSMg01no455_d22.b1 PHD_FILE: MSMg01no455_d22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:42 2005
(442 letters)
>mm_chr9_105884544_105885385
Length = 842
Score = 826 bits (427), Expect = 0.0
Identities = 436/441 (98%), Gaps = 5/441 (1%)
Strand = Plus / Minus
Query: 5 gaattctttc---atttatcccgtttataggatgtatctgtgaagactaaagaaaaaagt 61
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gaattctttcagaa--tatcccgtttataggatgtatctgtgaagactaaagaaaaaagt 682
Query: 62 tctttctctttctgggggagcttactagtttttatagtctcacttcctgtcctctctgct 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctttctctttctgggggagcttactagtttttatagtctcacttcctgtcctctctgct 622
Query: 122 tcttgacgacagatgcaatgtgaccagctctctcctgttcctgctccatgccttaccccc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcttgacgacagatgcaatgtgaccagctctctcctgttcctgctccatgccttaccccc 562
Query: 182 actgtgactgtccagaaaagcaactaatacaggggccattctggaggtggccttttgaga 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actgtgactgtccagaaaagcaactaatacaggggccattctggaggtggccttttgaga 502
Query: 242 gaccatgtttcatttacttattttatctattgttatataacaaattgcctcacttaatag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaccatgtttcatttacttattttatctattgttatataacaaattgcctcacttaatag 442
Query: 302 cttaaaaaaaaccctctcttcctatgtacaaaggcctgtgtgcgagtgagcaagtgtgtg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttaaaaaaaaccctctcttcctatgtacaaaggcctgtgtgcgagtgagcaagtgtgtg 382
Query: 362 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcttgagtgtattcatgtgtcgg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcttgagtgtattcatgtgtcgg 322
Query: 422 aatgcaggcacccatgtgcca 442
|||||||||||||||||||||
Sbjct: 321 aatgcaggcacccatgtgcca 301
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_d22.g1 MSMg01no455_d22.g1 CHROMAT_FILE:
MSMg01no455_d22.g1 PHD_FILE: MSMg01no455_d22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:42 2005
(166 letters)
>mm_chr9_105720554_105721119
Length = 566
Score = 311 bits (161), Expect = 1e-89
Identities = 164/165 (99%)
Strand = Plus / Minus
Query: 1 ctgtcttatgcctgaatctctccctccagtcccttcctctaggtctgtagggagacttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ctgtcttatgcctgaatctctccctccagtcccttcctctaggtctgtagggagacttta 306
Query: 61 ctctctcccacctctgccatttgcacttgagatttcctctgtctaggacagtactattct 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 305 ctctctcccacctctgccatttgcacttgagatttcctctgcctaggacagtactattct 246
Query: 121 ctagactccaggtcttggctaaatgcttccatccattgttaggat 165
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ctagactccaggtcttggctaaatgcttccatccattgttaggat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 166
Length of database: 566
Length adjustment: 8
Effective length of query: 158
Effective length of database: 558
Effective search space: 88164
Effective search space used: 88164
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
