Query= MSMg01no456_p24.b1 MSMg01no456_p24.b1 CHROMAT_FILE:
MSMg01no456_p24.b1 PHD_FILE: MSMg01no456_p24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:01 2005
(341 letters)
>mm_chr9_122609813_122610553
Length = 741
Score = 598 bits (309), Expect = e-175
Identities = 328/341 (96%), Gaps = 11/341 (3%)
Strand = Plus / Minus
Query: 1 agtgacctgctcattcatacacaatccactcaatggttgattcccccacatcccactgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 agtgacctgctcattcatacacaatccactcaatggttgattcccccacatcccactgcc 564
Query: 61 tggctcctgcttcgggaggtcactctttagatgctctgtatgcacacaagccctttgttt 120
|||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 563 tggctcctgcttcgggaggtca-----------ctctgtatgcacacaagccctttgttt 515
Query: 121 aaaatttgaatttggaaggagacaagaaaagcccgactgaagggttgagcgctgtagagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 aaaatttgaatttggaaggagacaagaaaagcccgactgaagggttgagcgctgtagagg 455
Query: 181 agctcagcttcagtgatcagagtatgagagccatacaactggggagatggggctgccctt 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 agctcagcttcagtgttcagagtatgagagccatacaactggggagatggggctgccctt 395
Query: 241 gagggtaggactgaggtttccaccagtgcagactttggatactaataaatttgttttatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 gagggtaggactgaggtttccaccagtgcagactttggatactaataaatttgttttatt 335
Query: 301 tggtgtgtaaatatgtgtgtgtgcaggtgcatgtgtgtgta 341
|||||||||||||||| ||||||||||||||||||||||||
Sbjct: 334 tggtgtgtaaatatgtatgtgtgcaggtgcatgtgtgtgta 294
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no456_p24.g1 MSMg01no456_p24.g1 CHROMAT_FILE:
MSMg01no456_p24.g1 PHD_FILE: MSMg01no456_p24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:01 2005
(533 letters)
>mm_chr9_122391549_122392480
Length = 932
Score = 1007 bits (521), Expect = 0.0
Identities = 530/533 (99%), Gaps = 1/533 (0%)
Strand = Plus / Plus
Query: 1 ttgacacatttatgattctcctgcctctcagctagtggagaaaatctatctcattgacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgacacatttatgattctcctgcctctcagctagtggagaaaatctatctcattgacag 260
Query: 61 ctgcaaggtcctccagagctcagggcttcaaaaagggcagaggtgccatcacggtagacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgcaaggtcctccagagctcagggcttcaaaaagggcagaggtgccatcacggtagacc 320
Query: 121 acagaggacagagtctcccgcaaaaccacacccgtgatgagtgccttcctctttagattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagaggacagagtctcccgcaaaaccacacccgtgatgagtgccttcctctttagattc 380
Query: 181 ctttcctctgggtttctcatagcagtggtgaccggctggagaagatgggcccttgaacct 240
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 381 ctttcctctgggtttctcatagcagtggtgaccagctggagaagatgg-cccttgaacct 439
Query: 241 attgtttgtgatgctttggtcactgctttaggcttccatcagagacacttcccccacagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 attgtttgtgatgctttggtcactgctttaggcttccatcagagacacttcccccacagg 499
Query: 301 ccccaggactttcagggtgggggctatacaattatcctgaagaaaggaagacacaggtgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ccccaggactttcagggtgggggctatacaattatcctgaagaaaggaagacacaggtgg 559
Query: 361 agaaatagctgttgtgctatgtaaaaagaaaactgttagaaataaacatggagatgatta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agaaatagctgttgtgctatgtaaaaagaaaactgttagaaataaacatggagatgatta 619
Query: 421 caacagctacaggccttcccattttgttggctagtcaactgtcgcatccgctctccacca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 caacagctacaggccttcccattttgttggctagtcaactgtcgcatccgctctccacca 679
Query: 481 gcaagaacgacacgaccaccagtccttctaacagcaggttattcagcaaactt 533
||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 680 gcaagaacgacacgaccaccagtccttctaacagcagtttattcagcaaactt 732
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 932
Length adjustment: 10
Effective length of query: 523
Effective length of database: 922
Effective search space: 482206
Effective search space used: 482206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
