Query= MSMg01no457_k20.b1 MSMg01no457_k20.b1 CHROMAT_FILE:
MSMg01no457_k20.b1 PHD_FILE: MSMg01no457_k20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:58 2005
(368 letters)
>mm_chr9_97783102_97783869
Length = 768
Score = 629 bits (325), Expect = 0.0
Identities = 358/369 (97%), Gaps = 2/369 (0%)
Strand = Plus / Plus
Query: 1 taaataagaagttgtatctactctttggatatataaagttacctacagataaactggagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaataagaagttgtatctactctttggatatataaagttacctacagataaactggagt 260
Query: 61 ctcaagagaagtaggcattgtccagtgggcccctctctgcttccccatgagagtagaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcaagagaagtaggcattgtccagtgggcccctctctgcttccccatgagagtagaatt 320
Query: 121 gggataagaacatccagagtgatagcccttgtgtggtttaaaaaactcagcttatatcca 180
|||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 gggagaagaacatccagagtgatagcccttgtgtggtttaaaaaactaagcttatatcca 380
Query: 181 cagcttcatgcacatatgactaaaataaggaagaatttcagcatggctagtgagtgtctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 cagcttcatgcacatatgactaaaataaggaagaatttcagcatggctagtgagtgtatc 440
Query: 241 tgagaggctttgttttctttcatttggaagaactccatgttgcaaag-gtaacaaaacag 299
|||||||| || |||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 441 tgagaggcagtgaagtctttcatttggaagaactccatgttgcaaagag-aacaaaacag 499
Query: 300 tccaacttaccaccttccatcccagcaatgcagtagcaatgatacctatctgtttgttga 359
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 500 tccaacttaccaccttccatcccagcaatgcagtagcaatgataccaatctgtttgttga 559
Query: 360 tgtctcttc 368
|||||||||
Sbjct: 560 tgtctcttc 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_k20.g1 MSMg01no457_k20.g1 CHROMAT_FILE:
MSMg01no457_k20.g1 PHD_FILE: MSMg01no457_k20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:58 2005
(248 letters)
>mm_chr9_98027545_98028192
Length = 648
Score = 410 bits (212), Expect = e-119
Identities = 239/248 (96%), Gaps = 2/248 (0%)
Strand = Plus / Minus
Query: 1 atatttctcctagaattaagagtgatgatgatggttgaaaatcaagatgactacagaggg 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atatttctcctagaattaagaatgatgatgatggttgaaaatcaagatgactacagaggg 388
Query: 61 cctaggccttcccactgttgacatccccaacaaagaaaacctgggcaaggcatgtctttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cctaggccttcccactgttgacatccccaacaaagaaaacctgggcaaggcatgtctttc 328
Query: 121 ctccagatgtcctgtgacataagtgtaaaactaacagaaaaatcaacatatctggttact 180
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ctctagatgtcctgtgaaataagtgtaaaactaacagaaaaatcaacatatctggttact 268
Query: 181 aatatttagagggcccttttcactgcaaagt-ggactattacatggtattgactaatatg 239
|| ||||||||||| ||||||||||||| | |||||||| |||||||||||||||||||
Sbjct: 267 aagatttagagggctcttttcactgcaa-gacggactattccatggtattgactaatatg 209
Query: 240 ggttcaga 247
||||||||
Sbjct: 208 ggttcaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
