Query= MSMg01no458_p07.b1 MSMg01no458_p07.b1 CHROMAT_FILE:
MSMg01no458_p07.b1 PHD_FILE: MSMg01no458_p07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:41 2005
(519 letters)
>mm_chr9_6480284_6481202
Length = 919
Score = 864 bits (447), Expect = 0.0
Identities = 503/524 (95%), Gaps = 9/524 (1%)
Strand = Plus / Plus
Query: 1 cactaccgatatagagagacccccccca---ccaagtgaacttgaaggcctgatttaaag 57
||||||||| || |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 200 cactaccgagat--agagaccccccccacccccaagtgaacttgaaggcctgatttaaag 257
Query: 58 cacattagggaattccctggtagctcacctctatgttaatctgttgggtccatctctaca 117
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cacattagggaataccctggtagctcacctctatgttaatctgttgggtccatctctaca 317
Query: 118 gacattccattcctggggcattgggggctggaaacttgctggggaggtctgggaattttt 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gacattccattcctggggcattgggggctggaaacttgctggggaggtctgggaattttt 377
Query: 178 actgatgaagtagctgaggaagtctggaaactgctgctaacccattgttcttgcttcagg 237
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 actgaggaagtagctgaggaagtctggaaactgctgctaacccattgttcttgcttcagg 437
Query: 238 ccaggt-gttggtg-natttccattacatgggcatgaaggttgaagtctgggatattttc 295
|||||| | ||| | | ||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 438 ccaggtggctgg-gaca-ttccattacatggtcatgaaggttggagtctgggatattttc 495
Query: 296 tgttagtcattgacttccctgggcttgcctggacttacccagtttttagacctagtctcc 355
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 496 tgttagtcattgacttccctgggcttgcctggacttacccagtttttagacctagtcttc 555
Query: 356 ataactgccaatttaaagtctgtcatggaatcagcctagccttctcatagctaggggtat 415
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ataacttccaatttaaagtctgtcatggaatcagcctagccttctcatagctaggggtat 615
Query: 416 gcaaggacctaacactatgctggtcattggttgtataaaatgaaagaaataagcagtgaa 475
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 616 gcaaggacctaacactgtgctggtcattggttgaataaaatgaaagaaataagcagtgaa 675
Query: 476 tgtgggcaatgctacgctcactgccttctgaatgttgaggacac 519
|||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 676 tgtgggcaatgctaggctcactgccttctgaatgttgaggacac 719
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_p07.g1 MSMg01no458_p07.g1 CHROMAT_FILE:
MSMg01no458_p07.g1 PHD_FILE: MSMg01no458_p07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:41 2005
(329 letters)
>mm_chr9_6646854_6647582
Length = 729
Score = 629 bits (325), Expect = 0.0
Identities = 328/329 (99%)
Strand = Plus / Minus
Query: 1 taaatgaaatatttgaagaatgaatgtcttgataaagtagtgtattatacaatataagtg 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 373 taaatgaaatatttgaagaatgaatgtcttgataaagcagtgtattatacaatataagtg 314
Query: 61 ggttatctctcatccaaaagaagaaaactttcttactctggtgcctccttaacaatgaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ggttatctctcatccaaaagaagaaaactttcttactctggtgcctccttaacaatgaca 254
Query: 121 gtgactgaatgctatatgtacccgaaaattatacaagggaagctaggagtgaaggataca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gtgactgaatgctatatgtacccgaaaattatacaagggaagctaggagtgaaggataca 194
Query: 181 gacctgttgatagtgtgcttctttagaatactcaacaccctggcttccattctcagtcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gacctgttgatagtgtgcttctttagaatactcaacaccctggcttccattctcagtcct 134
Query: 241 gaattagcccatgccatgggctacctgtaatatcagcaccttggagatagatgcaagata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gaattagcccatgccatgggctacctgtaatatcagcaccttggagatagatgcaagata 74
Query: 301 tatcagaagatcagtgtcatccttggcta 329
|||||||||||||||||||||||||||||
Sbjct: 73 tatcagaagatcagtgtcatccttggcta 45
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
