Query= MSMg01no460_i02.b1 MSMg01no460_i02.b1 CHROMAT_FILE:
MSMg01no460_i02.b1 PHD_FILE: MSMg01no460_i02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:46 2005
(492 letters)
>mm_chr9_48058520_48059410
Length = 891
Score = 897 bits (464), Expect = 0.0
Identities = 473/478 (98%), Gaps = 5/478 (1%)
Strand = Plus / Plus
Query: 17 ggaattcataaccttccc--tgatgagcctctcaccgtctcattctgctagaacctgcct 74
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 ggaattcataacc---ccgttgatgagcctctcaccgtctcattctgctagaacctgcct 273
Query: 75 gcctatccctccttcccagccctctatgtccctctcccttgctggactcgatgacttctg 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gcctatccctccttcccagccctctatgtccctctcccttgctggactcgatgacttctg 333
Query: 135 ccttgatgagtcttggttcttcttcctggtctgcctgcctccccctctcctgctgaatca 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ccttgatgagtcttggttcttcttcctggtctgcctgcctccccctctcctgctgaatca 393
Query: 195 ttctaccgccatccatgaaatcatgaccacaaggccaccatgtcagaaaaccgtcccaga 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ttctaccgccatccatgaaatcatgaccacaaggccaccatgtcagaaaaccgtcccaga 453
Query: 255 ttaacctcacatctctctaacgtcccccacccttttccagcggtctccagcatcccgctg 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ttaacctcacatctctctaacgtcccccacccttttccagcggtctccagcatcccgctg 513
Query: 315 tgggtatatttgatcaggttataacaaaccccctagtctcggacaaaacagccagggaca 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tgggtatatttgatcaggttataacaaaccccctagtctcggacaaaacagccagggaca 573
Query: 375 aagatgatccttgacccatttaattcctggggaattaaaattctgtgccctgtgctttgc 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 aagatgatccttgacccatttaattcctggggaattaaaattctgtgccctgtgctttgc 633
Query: 435 cttccgagaggtttgcagaaattattctgagcagctacaaacaagcaaagggcaggtt 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cttccgagaggtttgcagaaattattctgagcagctacaaacaagcaaagggcaggtt 691
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 891
Length adjustment: 10
Effective length of query: 482
Effective length of database: 881
Effective search space: 424642
Effective search space used: 424642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_i02.g1 MSMg01no460_i02.g1 CHROMAT_FILE:
MSMg01no460_i02.g1 PHD_FILE: MSMg01no460_i02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:46 2005
(506 letters)
>mm_chr9_48309248_48310153
Length = 906
Score = 714 bits (369), Expect = 0.0
Identities = 369/369 (100%)
Strand = Plus / Minus
Query: 138 tgaggctgggttttagccaggcaagcccagatcagctagtcagcatactcctgtgatctg 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 906 tgaggctgggttttagccaggcaagcccagatcagctagtcagcatactcctgtgatctg 847
Query: 198 cctgtcgttgctcaccagtgctgggtttacagccccacgtagccatgctcagctttatgt 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 cctgtcgttgctcaccagtgctgggtttacagccccacgtagccatgctcagctttatgt 787
Query: 258 gggggctggggatttgaaatcaggtcctcgggcttccatagctcggccttttcaaaccac 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 gggggctggggatttgaaatcaggtcctcgggcttccatagctcggccttttcaaaccac 727
Query: 318 tgagccatctttccagtccctcaatgtactcttatgttttgaacgttatcagaataaaaa 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 tgagccatctttccagtccctcaatgtactcttatgttttgaacgttatcagaataaaaa 667
Query: 378 tgtgaaaatttgttctttcttatgtaagttctcgttgtcctcctgggaaaaagaagctta 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tgtgaaaatttgttctttcttatgtaagttctcgttgtcctcctgggaaaaagaagctta 607
Query: 438 agttgtggggtctgacaactcatcagatcagaaatgataggaaaggatagtagaaaacat 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 agttgtggggtctgacaactcatcagatcagaaatgataggaaaggatagtagaaaacat 547
Query: 498 actgtggga 506
|||||||||
Sbjct: 546 actgtggga 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
