Query= MSMg01no460_i09.b1 MSMg01no460_i09.b1 CHROMAT_FILE:
MSMg01no460_i09.b1 PHD_FILE: MSMg01no460_i09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:47 2005
(344 letters)
>mm_chr9_15390204_15390947
Length = 744
Score = 665 bits (344), Expect = 0.0
Identities = 344/344 (100%)
Strand = Plus / Plus
Query: 1 acgccaggttcaggattgacacccagggaaagaggatgagctaatgcacagttcctgtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acgccaggttcaggattgacacccagggaaagaggatgagctaatgcacagttcctgtat 260
Query: 61 ccagaggccaatctgctgcatcctaggctgggtaccacccattccttatctggtcctgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagaggccaatctgctgcatcctaggctgggtaccacccattccttatctggtcctgct 320
Query: 121 ctatgctaaagctagaaatgtgacctagatatgttatgagtctctttaactacatgtgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctatgctaaagctagaaatgtgacctagatatgttatgagtctctttaactacatgtgtt 380
Query: 181 tacatatgcatgtgcatgtcatggcacatgtgtggaggttcagagaactcacaggtgttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tacatatgcatgtgcatgtcatggcacatgtgtggaggttcagagaactcacaggtgttg 440
Query: 241 gtcccttcctccactgtgagtcttgggcatggaactcaggttatcaggcttagctgcaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcccttcctccactgtgagtcttgggcatggaactcaggttatcaggcttagctgcaag 500
Query: 301 tccctctatctactgtccaccttgctcactccctctgaatctct 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tccctctatctactgtccaccttgctcactccctctgaatctct 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no460_i09.g1 MSMg01no460_i09.g1 CHROMAT_FILE:
MSMg01no460_i09.g1 PHD_FILE: MSMg01no460_i09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:48 2005
(512 letters)
>mm_chr9_15534208_15535118
Length = 911
Score = 940 bits (486), Expect = 0.0
Identities = 504/510 (98%), Gaps = 1/510 (0%)
Strand = Plus / Minus
Query: 1 agcctgcagacagtccacaaaggggcagaggggtctgcctttgagactcatccatttgca 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 709 agcctgcagacagtccacaaaggggcagaggagtctgcctttgagactcatccatttgca 650
Query: 61 ctcataggaagaaacatttaaagtgcttttgttctgataccaagccatgagaccttgaga 120
|||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 649 ctcacaggaagaaacatttaaagtgcttttgttctgataccaagccatcagaccttgaga 590
Query: 121 cattagctttgaagacagctgacattaatattgtaatttccctaaacctacacattttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 cattagctttgaagacagctgacattaatattgtaatttccctaaacctacacattttag 530
Query: 181 gccataagtactggaagtatttagagtagaaaatacttaacaagctagagactcggtatg 240
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct: 529 gccataagtactggaagtatttagagtag-aaatacttaacaagctagagactcgggatg 471
Query: 241 tatctctcggcagcagcttctccataatgtacctcaaaacaacgatgatgtgcccacctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tatctctcggcagcagcttctccataatgtacctcaaaacaacgatgatgtgcccacctt 411
Query: 301 agagggaggattatctccgattttcagatgacagtaactttacaattacttgcatggcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 agagggaggattatctccgattttcagatgacagtaactttacaattacttgcatggcct 351
Query: 361 tcagctattctagtttataacatgtgacgtttgggctggcaggtgggcaagcctgatgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tcagctattctagtttataacatgtgacgtttgggctggcaggtgggcaagcctgatgac 291
Query: 421 ctgaggttggtcaccagaaaggaagggctggggatggcggatcatatcataacccatcac 480
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 290 ctgaggttggtcaccagaaaggaagggctggggatggcggatcacatcataacccatcac 231
Query: 481 ccctgggtaaggtgggaggtagagaaagga 510
||||||||||||||||||||||||||||||
Sbjct: 230 ccctgggtaaggtgggaggtagagaaagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 911
Length adjustment: 10
Effective length of query: 502
Effective length of database: 901
Effective search space: 452302
Effective search space used: 452302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
