Query= MSMg01no461_l05.b1 MSMg01no461_l05.b1 CHROMAT_FILE:
MSMg01no461_l05.b1 PHD_FILE: MSMg01no461_l05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:24 2005
(293 letters)
>mm_chr9_82223782_82224474
Length = 693
Score = 424 bits (219), Expect = e-123
Identities = 278/305 (91%), Gaps = 18/305 (5%)
Strand = Plus / Plus
Query: 1 cacctaat-ttgcttagacttgatg-accagcatggggaaac--agcttgg-ataccctc 55
|||||||| ||||||||||||||| |||||||||||||||| ||||||| ||||||||
Sbjct: 195 cacctaatcatgcttagacttgatgtaccagcatggggaaacagagcttggaataccctc 254
Query: 56 tc-agaggacaaagcgaaaggga------gaggggaagacactgggggcggacccagagg 108
|| |||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 255 tcaagaggacaaagc------gaaagggagaggggaagacactgggggcggacccagagg 308
Query: 109 agtgacagagtttgggatgtatataaataaagatattgagatatttttgtggcaactttt 168
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 309 ggtgacagagtttgggatgtatataaataaagatattgagatatttttgcggcaactttt 368
Query: 169 tatagaattattatatcctctgagatactattcttgaagaaatcagtcctttaaggaagg 228
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tatagaattagtatatcctctgagatactattcttgaagaaatcagtcctttaaggaagg 428
Query: 229 aattattactggaatgtattgtgggctttcttttcttattttttataatagagccaagaa 288
| ||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||
Sbjct: 429 acttattactggaatgtattgtgggctttcttttcccattctttataatagagcccagaa 488
Query: 289 ttgca 293
|||||
Sbjct: 489 ttgca 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_l05.g1 MSMg01no461_l05.g1 CHROMAT_FILE:
MSMg01no461_l05.g1 PHD_FILE: MSMg01no461_l05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:24 2005
(346 letters)
>mm_chr9_82409259_82410004
Length = 746
Score = 667 bits (345), Expect = 0.0
Identities = 345/345 (100%)
Strand = Plus / Minus
Query: 1 tctaacaacacagaagtatgcacacaagtctttatctgctgcattgatagagatttccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tctaacaacacagaagtatgcacacaagtctttatctgctgcattgatagagatttccgc 300
Query: 61 ttacttttgtcttttgttgaaaaacaattcactatcttttggagacagtgttaggaatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ttacttttgtcttttgttgaaaaacaattcactatcttttggagacagtgttaggaatgt 240
Query: 121 gggttgatttttatgaaacagaattttttaaaaaatatattttatttttaatttattttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gggttgatttttatgaaacagaattttttaaaaaatatattttatttttaatttattttt 180
Query: 181 tacactccatattacattcccaccccacccccatccactttctgtctgctccacatccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 tacactccatattacattcccaccccacccccatccactttctgtctgctccacatccca 120
Query: 241 tacttcctccccaccccaccccatctctacgtggatgtccccaatagagatttttaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 tacttcctccccaccccaccccatctctacgtggatgtccccaatagagatttttaaatt 60
Query: 301 tagccttcaaagattctttccacagtcatgatccagatcccctta 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 tagccttcaaagattctttccacagtcatgatccagatcccctta 15
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
