Query= MSMg01no462_j05.b1 MSMg01no462_j05.b1 CHROMAT_FILE:
MSMg01no462_j05.b1 PHD_FILE: MSMg01no462_j05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:38 2005
(261 letters)
>mm_chr9_112496517_112497177
Length = 661
Score = 398 bits (206), Expect = e-115
Identities = 245/258 (94%)
Strand = Plus / Plus
Query: 4 gaattctcagagctggtgactggagacaagcagctctccggggcttactggtggatggag 63
|||||||||||||||| || ||||||||||||| |||| |||| ||||||||||||||||
Sbjct: 204 gaattctcagagctggagagtggagacaagcaggtctctggggattactggtggatggag 263
Query: 64 atgggaggatccctctgcctacctgactagttatcctagtgacacagtctgtcgaataag 123
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 264 atgggaggatccctctgcctacctgactagttatcctagtgacacagtctattgaataag 323
Query: 124 aataagagtaaaagaataggaggaggagggaagaacttatgagtggctcttgaggctggc 183
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agtaagagtaaaagaataggaggaggagggaagaacttatgagtggctcttgaggctggc 383
Query: 184 ttctggcctccattatcacgtacgcacacatgcatgtgtgcttaaagagaggagggggtg 243
||||||| ||||| |||| ||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 384 ttctggcttccatcatcatgtacgcaaacatgcatgtgtgcttacagagaggagggggtg 443
Query: 244 ggggagagagagagaaag 261
||||||||||||||||||
Sbjct: 444 ggggagagagagagaaag 461
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 261
Length of database: 661
Length adjustment: 9
Effective length of query: 252
Effective length of database: 652
Effective search space: 164304
Effective search space used: 164304
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no462_j05.g1 MSMg01no462_j05.g1 CHROMAT_FILE:
MSMg01no462_j05.g1 PHD_FILE: MSMg01no462_j05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:36:38 2005
(448 letters)
>mm_chr9_112620829_112621676
Length = 848
Score = 563 bits (291), Expect = e-164
Identities = 312/319 (97%), Gaps = 2/319 (0%)
Strand = Plus / Minus
Query: 131 gaggatctggagctgaatgagaagaacagatgagaaagcaagctgaaggcaaaattcttt 190
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 848 gaggatctgaagctgaatgagaagaacagaggagaaagcaagctgaaggcaaaattcttt 789
Query: 191 ttcttctgcttcctgactgtacatacaatgtatccagtggctgcacctttctgttcct-a 249
|||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||| |
Sbjct: 788 ttcttctgcttcctgactgtacatactatgtatccagtggctgtacctttctg-tcctca 730
Query: 250 taatatcccagtgtgattaactaaactggtaaaaatgagctcaaatcaattcttctcttc 309
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 taatatcccagtgtgattgactaaactggtaaaaatgagctcaaatcaattcttctcttc 670
Query: 310 tgaagttgattttgtcatgtaaattaatagaaccattgaactataattctaactcttttt 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 tgaagttgattttgtcatgtaaattaatagaaccattgaactataattctaactcttttt 610
Query: 370 gcctttgtagttttagacagagtaagcctggatggcccaaattatttcttttctgtattc 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gcctttgtagttttagacagagtaagcctggatggcccaaattatttcttttctgtattc 550
Query: 430 tttacaatttatcaggttg 448
|||||||||||||||||||
Sbjct: 549 tttacaatttatcaggttg 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
