Query= MSMg01no463_h15.b1 MSMg01no463_h15.b1 CHROMAT_FILE:
MSMg01no463_h15.b1 PHD_FILE: MSMg01no463_h15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:54 2005
(577 letters)
>mm_chr9_10931260_10932239
Length = 980
Score = 992 bits (513), Expect = 0.0
Identities = 562/580 (96%), Gaps = 3/580 (0%)
Strand = Plus / Plus
Query: 1 ttgcttaggtattcagcaagtcattgcttggaggcacctataacaaaacaatactgaaag 60
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgcttaggaattcagcaagtcattgcttggaggcacctataacaaaacaatactgaaaa 260
Query: 61 gaagcacacagatccattcacaaggacaaaattggagcatacgtgctatggaatatcaca 120
|||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 261 gaagcacacagatccattcacaaggacaaaattggagcatacgtactatggaatgccaca 320
Query: 121 gttccaggagacttagcttctgtgaaactctttgcctcaggactgcatcaaggcttttgg 180
|||| || ||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 gttctagaagactcagcttctgtgaaactctttgcctcaggactgcatccaggcttttgg 380
Query: 181 ccggtcatgagtgtcactattgtagtggatgtagcacttatccctaattatttaaagaca 240
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccggtcatgagtgtcactaatggagtggatgtagcacttatccctaattatttaaagaca 440
Query: 241 ttttaccttgtctacacacaaactgttcaaatgtatgcttcttctgcaatggttgaataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttaccttgtctacacacaaactgttcaaatgtatgcttcttctgcaatggttgaataa 500
Query: 301 ttaaaaatgaagtagtatctgaagatttactataaattcctttaacagtcttttgtacag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaaaaatgaagtagtatctgaagatttactataaattcctttaacagtcttttgtacag 560
Query: 361 atgtcatatatttttgtgaattaacacttaaataggttaagatattaaaaatttaaagat 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagtcatatatttttgtgaattaacacttaaataggttaagatattaaaaatttaaagat 620
Query: 421 gttagcatatgaagaaaataaaagtaatacaaagtatatgaggatcattactctttaaag 480
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 621 gttagcatatgaagaaaataaaagtaatgcaaagtatatgaggatcattactctttaaag 680
Query: 481 atcaggttgacgttct---tcaaattanatattatacagagaagccttcaataaatatct 537
|||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 681 atcaggttgacgttctccttcaagttaaatattatacagagaagccttcaataaatatct 740
Query: 538 gctacatgccctcctgaagtaagcattatttctgtgatgg 577
||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gctacatgccctcctgaagtaagcattatttctgtgatgg 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 980
Length adjustment: 10
Effective length of query: 567
Effective length of database: 970
Effective search space: 549990
Effective search space used: 549990
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_h15.g1 MSMg01no463_h15.g1 CHROMAT_FILE:
MSMg01no463_h15.g1 PHD_FILE: MSMg01no463_h15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:37:54 2005
(618 letters)
>mm_chr9_11060386_11061404
Length = 1019
Score = 1151 bits (595), Expect = 0.0
Identities = 613/619 (99%), Gaps = 1/619 (0%)
Strand = Plus / Minus
Query: 1 tgtcctagaaaa-aattttgagcactacaaattgcaatgctgatagtaatgcaaaagaag 59
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 tgtcctagaaaataattttgagcactacaaattgcaatgctgatagtaatgcaaaagaag 760
Query: 60 tacatgaagtactacatttgtcgattgaaacaaaatgtgtagagacaaaatatcacaagt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 tacatgaagtactacatttgtcgattgaaacaaaatgtgtagagacaaaatatcacaagt 700
Query: 120 attgactggattatttctgtaatatttccatcaagtagatcaatggtaatgtattttaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 attgactggattatttctgtaatatttccatcaagtagatcaatggtaatgtattttaat 640
Query: 180 aaactatacctacacgcaagaagttaactactccttgtttaaattcataaagaattgggt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 aaactatacctacacgcaagaagttaactactccttgtttaaattcataaagaattgggt 580
Query: 240 aagcttcttttgtaaatagagtattcacttcttaacaaaatttaagactgtttttaaaca 299
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 aagcttcaggtgtaaatagagtattcacttcttaacaaaatttaagactgtttttaaaca 520
Query: 300 aacccaatagatttacaccttaattagaacagaagcaaagcaagcactgacaagctataa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 aacccaatagatttacaccttaattagaacagaagcaaagcaagcactgacaagctataa 460
Query: 360 gacgtttagaaaaaattactacttataacaggtaatgatagtgaaggctgggtttctagt 419
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gaagtttagaaaaaattactacttataacaggtaatgatagtgaaggctgggtttctagt 400
Query: 420 gtagtgtgtttcctgaagaaagtgagctgcagtaacaagtctagatgccacacttcatat 479
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 399 gtagtgtgtttcctgaagaaagtgagctgtagtaacaagtctagatgccacacttcatat 340
Query: 480 aggaaagcatttgaagtttgggcatgtttgtgagcatactgaatagaaaaacataatttg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 aggaaagcatttgaagtttgggcatgtttgtgagcatactgaatagaaaaacataatttg 280
Query: 540 gaaaggaagcatggcagacataattttggccatgcttatctcacagccataaaatacatg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gaaaggaagcatggcagacataattttggccatgcttatctcacagccataaaatacatg 220
Query: 600 tcataatgtttaaatgtcc 618
|||||||||||||||||||
Sbjct: 219 tcataatgtttaaatgtcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1019
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1009
Effective search space: 613472
Effective search space used: 613472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
