GGNNCCTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATC
CGCGGAATTCCACCCCATTGCCTCCAGAGTTCTCTTCTGACATCCATGAG
CACCAGGCACACAAGTGCTGCATTTATATAGATGCAAGTGAAACACCCAT
TGACTAAAATAATAAGTAAATTTTAAAGACACCTAACAGCAGAAAATGTG
CCTGCCTTTTTTCTCTACAGGGACTCAGATTTCTGAGGATAGACTGTTTC
TGAGTATACATTCATCCCAACAATTCCACAGAAGGCCTCAAATATCTCAA
AGTTCTTTTCTATCATGCCCCTGTTTTATTAGATATTTTCTATATTTACA
TTTCAAATGTTATGCCTCTTTTTCTGGTTTCCCCTCTGAAAACTCCACAA
CCTCTCCCTCCTCCCCCTGCTCACCAACTCACCCATTCCTGCTTCCCAGT
TCTGACATTCCCCTACACTGGGCATCAAGTCTTCACAGAACCAAGAGCCT
CTCCTCCTATTGATGACCAACAAGGTCATCCTCTATTACATATGCGGCTG
GAGCCATGGGTGCCTCCAATTATGCTCTTTGGTTGATGGTTCAGTCCCTG
GGAGCTCTGGGGGTACTGCTTGGATCATATTGTTCCTTCTATGGGGCTGC
AAACCCCTTCATTTCCTTGGATCCTTTTTCTAGCTCCTCCATTGAGGACC
CTGTACTCAGTTTAATGGTTGGCTAAAAGAGTCTACCTCTGTATTTGTC

NNNTTCTATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTTTTTAAAATTTAATCCTTTATT
TGTTTGTTTATTTGTTTATTTATTTATTATTACATACCAGATTTTATTCC
CCTCCTGGTCTATCCTTTGACCACATCCCATATCTCCTCCCTGCCCCTGT
TTCCATGAGAATGTACCCACTATGCACTCCCGACCCCACCAGACCTCTAA
ACTACCTGAGGCCTCCAGTCTCTTAAAAGTTAGGTGAATCTTTTCTGATT
GAACCCAGACCCAGGAGTCCTCTGTTTTATATGTGTTGGGGACATCATAT
CAGCTGGTGTATGCTGCCTGTTTGGTGGTCCAGTGTTTGAGAGATCTTGG
GGGTCCAAATTAATTGAGACTTCTTGTCCTCCTATAAGGTCACCCTCCTC
CTCAGCTTCTTCCAGCTTTTCTGTAATTCAATCACACAGTGGCCATCAGC
TTCTGTCCATTGGTTGGGTGCAAATATCTGCAACTGACACTTTTAGCTGT
TTTGGGGTCTTTCAGAGGGTAGTCATGATAGGTCCCTTTTTTGTGAGTGC
TCCCTTAACTTATTAATAGTGCTCGGCCTTGTGTCCTTTGAACTGAATTC
CCCTTTTGTCTTTTTTTCTGGACCTTCCTTTCCTTCTGTGTCCTCTTCTT
TTCCTTCTTTTCCCGTTCTTTTCTTATAAATAATATCTTCTCTTTAAATT
TTTCCTTTCG

Query= MSMg01no463_i20.b1 MSMg01no463_i20.b1 CHROMAT_FILE:
MSMg01no463_i20.b1 PHD_FILE: MSMg01no463_i20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:00 2005
         (607 letters)



>mm_chr9_6235010_6236016
          Length = 1007

 Score = 1110 bits (574), Expect = 0.0
 Identities = 602/614 (98%), Gaps = 8/614 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gttctcttctgacatccatgagcaccaggcacacaagtgctgcatttatatagatgcaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gttctcttctgacatccatgagcaccaggcacacaagtgctgcatttatatagatgcaag 257

                                                                       
Query: 61  tgaaacacccattgactaaaataataagtaaattttaaaga---cacctaacagcagaaa 117
           |||||||||||||||||||||||||||||||| ||||||||   |||||||| |||||||
Sbjct: 258 tgaaacacccattgactaaaataataagtaaaatttaaagaaaacacctaactgcagaaa 317

                                                                       
Query: 118 atgtgcctgccttttttctctacagggactcagatttctgaggatagactgtttctgagt 177
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atgtgcctgccttttttctctacagggactcagatttctgaggatagactgtttctgagt 377

                                                                       
Query: 178 atacattcatcccaacaattccacagaaggcctcaaatatctcaaagttcttttctatca 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 atacattcatcccaacaattccacagaaggcctcaaatatctcaaagttcttttctatca 437

                                                                       
Query: 238 tgcccct---gttttattagatattttctatatttacatttcaaatgttatgcctctttt 294
           |||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tgcccctaatgttttattagatattttctatatttacatttcaaatgttatgcctctttt 497

                                                                       
Query: 295 tctggtttcccctctgaaaactccacaacctctccctcctccccctgctcaccaactcac 354
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 498 tctggtttcccctctgaaaactccacaacccctccctcctccccctgctcaccaactcac 557

                                                                       
Query: 355 ccattcctgcttcccagttctgacattcccctacactgggcatcaagtcttcacagaacc 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ccattcctgcttcccagttctgacattcccctacactgggcatcaagtcttcacagaacc 617

                                                                       
Query: 415 aagag-cctctcctcctattgatgaccaacaaggtcatcctctattacatatgcggctgg 473
           || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aa-aggcctctcctcctattgatgaccaacaaggtcatcctctattacatatgcggctgg 676

                                                                       
Query: 474 agccatgggtgcctccaattatgctctttggttgatggttcagtccctgggagctctggg 533
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 agccatgggtgcctccaattatgctctttggttgatggttcagtccctgggagctctggg 736

                                                                       
Query: 534 ggtactgcttggatcatattgttccttctatggggctgcaaaccccttcatttccttgga 593
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ggtactgcttggatcatattgttccttctatggggctgcaaaccccttcatttccttgga 796

                         
Query: 594 tcctttttctagct 607
           ||||||| ||||||
Sbjct: 797 tccttttcctagct 810


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space:   595209
Effective search space used:   595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)