Query= MSMg01no463_p17.b1 MSMg01no463_p17.b1 CHROMAT_FILE:
MSMg01no463_p17.b1 PHD_FILE: MSMg01no463_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:35 2005
(244 letters)
>mm_chr9_77854330_77854978
Length = 649
Score = 429 bits (222), Expect = e-125
Identities = 241/250 (96%), Gaps = 7/250 (2%)
Strand = Plus / Plus
Query: 1 ctggacacccaaga-atgcaaaccaacgctatattcctaatggcgccttgccaatccccc 59
||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggatacccaagaga-gcaaaccaacgctatattcctaatggcgccttgccaatccccc 259
Query: 60 agcaaaggccttggaactgagccttagctactgccacctccgcacttcaccaggctcgtg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agcaaaggccttggaactgagccttagctactgccacctccgcacttcaccaggctcgtg 319
Query: 120 ggctccaccttctggccagtgttcccctggcctggcctg-----ttcgttgacggtacag 174
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 320 ggctccaccttctggccagtgttcccctggcctggcctggcctgttcgttgacggtacag 379
Query: 175 gagactcttaagggcagcaattttgctggattcctctgctagcccgggacagtttggaat 234
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 380 gagactcttaagggcagcaattttgctgaattcctctgctagcccgggacagtttggaat 439
Query: 235 ggcacagcct 244
||||||||||
Sbjct: 440 ggcacagcct 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 649
Length adjustment: 9
Effective length of query: 235
Effective length of database: 640
Effective search space: 150400
Effective search space used: 150400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no463_p17.g1 MSMg01no463_p17.g1 CHROMAT_FILE:
MSMg01no463_p17.g1 PHD_FILE: MSMg01no463_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:36 2005
(327 letters)
>mm_chr9_78038924_78039650
Length = 727
Score = 576 bits (298), Expect = e-169
Identities = 309/316 (97%), Gaps = 6/316 (1%)
Strand = Plus / Minus
Query: 1 cattcaccttaggggtggactcccgatgaatgggaaactttgccccctccctctctttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cattcaccttaggggtggactcccgatgaatgggaaactttgccccctccctctctttct 257
Query: 61 ccttaaagaattttttcccctttcattttaccctgtagaatggggcagatggttaaaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ccttaaagaattttttcccctttcattttaccctgtagaatggggcagatggttaaaaag 197
Query: 121 gcatgaccgccattcctggaacagtcataggcagcccatcaagaaccgtttgtagttaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gcatgaccgccattcctggaacagtcataggcagcccatcaagaaccgtttgtagttaag 137
Query: 181 gttacaggtggggcatagctctgcctttgagaaacagaggt------atgaacaggaata 234
||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 136 gttacaggtggggcatagctctgcctttgagaaacagaggtacagtcatgaacaggaata 77
Query: 235 aacctagtttgtctttactgtaggacggctttgaagcctaaaacggaggcaagctagttc 294
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 76 aacctagtttgtctttactgtaggacggctttgaagcctaaaactgaggcaagctagttc 17
Query: 295 ttcagtacctaacccg 310
||||||||||||||||
Sbjct: 16 ttcagtacctaacccg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
