Query= MSMg01no464_e10.b1 MSMg01no464_e10.b1 CHROMAT_FILE:
MSMg01no464_e10.b1 PHD_FILE: MSMg01no464_e10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:59 2005
(126 letters)
>mm_chr9_38634470_38634995
Length = 526
Score = 228 bits (118), Expect = 8e-65
Identities = 124/126 (98%)
Strand = Plus / Minus
Query: 1 ggaaacttcattttcttaaatgagtgatactggttatataccacactatgagtgacactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ggaaacttcattttcttaaatgagtgatactggttatataccacactatgagtgacactg 267
Query: 61 tttatatatcacactatgaatgacactggctatataccatactgcagttaaggcccctgt 120
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 266 tttatatatcacactatgaatgacactggctatataccatactgcagggaaggcccctgt 207
Query: 121 cttagg 126
||||||
Sbjct: 206 cttagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 126
Length of database: 526
Length adjustment: 8
Effective length of query: 118
Effective length of database: 518
Effective search space: 61124
Effective search space used: 61124
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no464_e10.g1 MSMg01no464_e10.g1 CHROMAT_FILE:
MSMg01no464_e10.g1 PHD_FILE: MSMg01no464_e10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:59 2005
(454 letters)
>mm_chr9_38473076_38473930
Length = 855
Score = 770 bits (398), Expect = 0.0
Identities = 439/453 (96%), Gaps = 1/453 (0%)
Strand = Plus / Plus
Query: 3 cacagttagtattatcaaagataaatttcccaatgcagtgaccaggtacattgccagaaa 62
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cacagttaatattatcaaagataaatttcccaatgcagtgaccaggtacattgccagaaa 262
Query: 63 cacaaagaacaggggtatttgaagataaggcttgtcagttaatcccaccagaatgaattc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cacaaagaacaggggtatttgaagataaggcttgtcagttaatcccaccagaatgaattc 322
Query: 123 agtcaccaaagagacatttactgagtccattcttctctgagagaatctgtggacacagaa 182
|| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 323 agccaccaaagagacatttactgagtccatttttctctgagagaatctgtggacacagaa 382
Query: 183 agtagagctatgttagaggataatccacactccatgctggattcttctcccctgtgaa-t 241
||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||| |
Sbjct: 383 agtagagctatgttagaagacaatccacactccatgctggatccttctcccctgtgaagt 442
Query: 242 gtangttgctagtgtttattctagtcatggctatgtttacagaatcagctggtgaatgtt 301
||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 443 gtatgttggtagtgtttattctagtcatggctatgtttacagaatcagctggtgagcgtt 502
Query: 302 caaaaaattatcttaagtctgatatcaaattgttcaaatttttagtattatttataaatt 361
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 503 caaaaaattatcttaagtctgatatcaaattgttcaaaattttagtattatttataaaat 562
Query: 362 atgacaaaataaaggagaagacctcactaaaaagattcagtcttcccccacctcctgtct 421
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atgacaaaataaaggagaaaacctcactaaaaagattcagtcttcccccacctcctgtct 622
Query: 422 tctttcactagagccttcccacaacaatgaaaa 454
|||||||||||||||||||||||||||||||||
Sbjct: 623 tctttcactagagccttcccacaacaatgaaaa 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 855
Length adjustment: 10
Effective length of query: 444
Effective length of database: 845
Effective search space: 375180
Effective search space used: 375180
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
