Query= MSMg01no465_b12.b1 MSMg01no465_b12.b1 CHROMAT_FILE:
MSMg01no465_b12.b1 PHD_FILE: MSMg01no465_b12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:04 2005
(353 letters)
>mm_chr9_66123281_66124033
Length = 753
Score = 652 bits (337), Expect = 0.0
Identities = 346/349 (99%)
Strand = Plus / Plus
Query: 5 gaattcacagttctcgctcttaatctagaaaacagttgattatattatctagggacaaaa 64
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacagcccttgctcttaatctagaaaacagttgattatattatctagggacaaaa 264
Query: 65 tgacattgtaagatctcccattcaagttaaaacaatagcagaacccagggaggcggcgat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgacattgtaagatctcccattcaagttaaaacaatagcagaacccagggaggcggcgat 324
Query: 125 tgtgagggacccgtgcgtcagtgaggcattctctgtagccctgcgcacaaccttgtaagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtgagggacccgtgcgtcagtgaggcattctctgtagccctgcgcacaaccttgtaagg 384
Query: 185 gaagtgagctccttttttaaggatgatgaagccagcctcagcaaagttaagaactgtgcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaagtgagctccttttttaaggatgatgaagccagcctcagcaaagttaagaactgtgcc 444
Query: 245 tgccttctcccagctggagctcttgggatctggactccagcccagatttgcctgccctgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgccttctcccagctggagctcttgggatctggactccagcccagatttgcctgccctgg 504
Query: 305 attcacattctacttttcctgggggtgggggtgggggagtaaaaaatga 353
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 attcacattctacttttcctgggggtgggggtgggggagtaaaaaatga 553
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no465_b12.g1 MSMg01no465_b12.g1 CHROMAT_FILE:
MSMg01no465_b12.g1 PHD_FILE: MSMg01no465_b12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:04 2005
(276 letters)
>mm_chr9_66273586_66274261
Length = 676
Score = 526 bits (272), Expect = e-154
Identities = 275/276 (99%), Gaps = 1/276 (0%)
Strand = Plus / Minus
Query: 1 tgaattccatctccaatagagggggaaaatctaattttcagttttatggagatgaaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tgaattccatctccaatagagggggaaaatctaattttcagttttatggagatgaaaata 575
Query: 61 atatgaaaaaattcctacttataagtacagctttcatataatttagaaaaaagtaatatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 atatgaaaaaattcctacttataagtacagctttcatataatttagaaaaaagtaatatc 515
Query: 121 catgggtatatattatgttaaaattatttttttanaatacagaagaaatttaaacaaaga 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 514 catgggtatatattatgttaaaattattttttta-aatacagaagaaatttaaacaaaga 456
Query: 181 caccattttcttaagctgtccaaattgaagggctgtatatgacttaaccaaggaatgtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 caccattttcttaagctgtccaaattgaagggctgtatatgacttaaccaaggaatgtca 396
Query: 241 ggttttagtgcattgcactgagcttattttacttaa 276
||||||||||||||||||||||||||||||||||||
Sbjct: 395 ggttttagtgcattgcactgagcttattttacttaa 360
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
