Query= MSMg01no466_f17.b1 MSMg01no466_f17.b1 CHROMAT_FILE:
MSMg01no466_f17.b1 PHD_FILE: MSMg01no466_f17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:48 2005
(246 letters)
>mm_chr9_106494499_106495144
Length = 646
Score = 476 bits (246), Expect = e-139
Identities = 246/246 (100%)
Strand = Plus / Minus
Query: 1 atgacaccccccaaggtagagtaggagcatagactcctaccctacccaggttgcgataca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 atgacaccccccaaggtagagtaggagcatagactcctaccctacccaggttgcgataca 387
Query: 61 atcctccagtcctcctgttgggatggtcccaaagaagattcagtaggcacctgtggatag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atcctccagtcctcctgttgggatggtcccaaagaagattcagtaggcacctgtggatag 327
Query: 121 acattttttaagtgcagggaaattaacattttcactctgttgcgccttccaaactggcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 acattttttaagtgcagggaaattaacattttcactctgttgcgccttccaaactggcat 267
Query: 181 gaggtgtctctccttatttagagcttctccaatttctttccatctgtgttttggagtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gaggtgtctctccttatttagagcttctccaatttctttccatctgtgttttggagtttt 207
Query: 241 taacca 246
||||||
Sbjct: 206 taacca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no466_f17.g1 MSMg01no466_f17.g1 CHROMAT_FILE:
MSMg01no466_f17.g1 PHD_FILE: MSMg01no466_f17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:41:49 2005
(199 letters)
>mm_chr9_106322779_106323376
Length = 598
Score = 373 bits (193), Expect = e-108
Identities = 196/197 (99%), Gaps = 1/197 (0%)
Strand = Plus / Plus
Query: 1 tttgaaaggtcacatcatcctgccctctctccccttccaagagccttccagatgatcccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgaaaggtcacatcatcctgccctctctccccttccaagagccttccagatgatcccc 260
Query: 61 agggaggggaggtccagggaggcagtcaaagctttaaccccagggctgcttggtgaacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggaggggaggtccagggaggcagtcaaagctttaaccccagggctgcttggtgaacag 320
Query: 121 agtcctccctctcctacccccccccccgggggcccctctttagcctgggctagggaggtg 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 agtcctccctctcctacccccccccc-gggggcccctctttagcctgggctagggaggtg 379
Query: 181 gatggagggggggagaa 197
|||||||||||||||||
Sbjct: 380 gatggagggggggagaa 396
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 199
Length of database: 598
Length adjustment: 8
Effective length of query: 191
Effective length of database: 590
Effective search space: 112690
Effective search space used: 112690
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
