NNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTCCTAATTTCTCATTCATGGTTGTGTCTGCCAAACCACAC
TGACTTGTCAATCCCAAATGTCAAGAAGTATTACTGGAGTTACTTACTGC
TTTTTTTTTTCCATTTTTTATTAGGTATTTAACTCATTTACATTTCCAAT
GCTATACCAAAAGTCCCCCATATCCACCCACCCCCACTCCCCTGCCCACC
CACTCCCCCTTTTTGGCCCTGGTATTCCCCTGTACTGGGGCATATAAAGT
TTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCT
TTTGATATATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGCTC
ATAATGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGCTA
CTTTCTCTAGCTCCTCCATTGGGAGCCCTATGATCCATCCATTAGCTGAC
TGTGAGCATCCACTTCTGTGTTTGCTGGGCCCCGGCATAGTCTCACAAGA
GACAGCTACATCTGCGTCCTTTTCATAAAATCTTGCTAGTGTATGCAATG
GTGTCCAGCGTTGGATGCTGATTATTGGGGTGAATCCCCGGTTATGGGAG
CCTCCTACTGGTTCATACCTTTCTCTCCGCTCCCAAATCCGGCCTTGGAA
TACCTTCCTGGGGGGTTTGGTCCCCAACCTCTCACAGGGAAAAATGTTCT
ACCCCCTTTTATTTATCCTCTTGGG

NCCCGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATAATTACAGCCAGTGCCCATGGA
GATGAATGAACAGACGAGACAGCAGGTCAGATGATCATGTTCAGACCCAA
CAAGGAAATAGTCACTGTTGAAAATGGAGTCACTTATTTTCTTCCTTCAT
CTTTTCCTAACATCTGAAAATTAGCATACATAATGAGACAAGGAGAGAAA
CATTTGAGTGCAGCATAGCACAGGCATGTGTAATGATTGCTTATAGGAGG
TCAGAGAAGAGCACATATAAATTTCATATAATCCATGGAGGATCACTAAA
ATGAAGACAAGGCTGGGAAATGTGAAAAGGCTGTATGAAGCTACAGAATT
GGTTAGTTTCCCTGGGCAATCTCCATCAGCAGCAAAGGGGGTTGTGACTT
AGTACTTTTGGAGAACTGTTACTAAGAAATCAATATTTAATAGAGTGTAC
CTTCAAGCACTTGAATTCCTGACTAAGCCAGAGTGTGCATCTTGGGGTAT
GTGAATTGTATGTGAAGTCCTTTTCTTCGTCTAAGAGACAGTGTTGTGCC
TCTAAGTTAAGTTTTACTTTCACTTTAGGAACAATAACAATATTAAATTT
TCCCAACAATATTTTTCCTTTTGGTTCCCTCAATATAAAAATTTTTTCTC
AAAAAGTCTGGGGAAGTCCCTCACACGGGCCCAATAGGGCACAAACATCA
ATAAAAATCCTTTTCCCCCAAACCCCTG

Query= MSMg01no468_b20.g1 MSMg01no468_b20.g1 CHROMAT_FILE:
MSMg01no468_b20.g1 PHD_FILE: MSMg01no468_b20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:11 2005
         (439 letters)



>mm_chr9_10311674_10312512
          Length = 839

 Score =  787 bits (407), Expect = 0.0
 Identities = 431/439 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ataattacagccagtgcccatggagatgaatgaacagacgagacagcaggtcagatgatc 60
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 ataattacagccagtgcccatggagatgaatgaacagatgagacagcaggtcagatgatc 260

                                                                       
Query: 61  atgttcagacccaacaaggaaatagtcactgttgaaaatggagtcacttattttcttcct 120
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 atgttcagacccaacaaggaaatagtcacagttgaaaatggagtcacttattttcttcct 320

                                                                       
Query: 121 tcatcttttcctaacatctgaaaattagcatacataatgagacaaggagagaaacatttg 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 tcatcttttcctaacatctgaaaattagcatacataatgagacaaggagagaaacacttg 380

                                                                       
Query: 181 agtgcagcatagcacaggcatgtgtaatgattgcttataggaggtcagagaagagcacat 240
           ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtgcagtatagcacagacatgtgtaatgattgcttataggaggtcagagaagagcacat 440

                                                                       
Query: 241 ataaatttcatataatccatggaggatcactaaaatgaagacaaggctgggaaatgtgaa 300
           |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataaatttcaaataagccatggaggatcactaaaatgaagacaaggctgggaaatgtgaa 500

                                                                       
Query: 301 aaggctgtatgaagctacagaattggttagtttccctgggcaatctccatcagcagcaaa 360
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 aaggctgtatgaagctacagaattggttagtttccctgggcaacctccatcagcagcaaa 560

                                                                       
Query: 361 gggggttgtgacttagtacttttggagaactgttactaagaaatcaatatttaatagagt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggggttgtgacttagtacttttggagaactgttactaagaaatcaatatttaatagagt 620

                              
Query: 421 gtaccttcaagcacttgaa 439
           |||||||||||||||||||
Sbjct: 621 gtaccttcaagcacttgaa 639


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space:   356900
Effective search space used:   356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)