GGATCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGC
GGAATTCCACTGAANTTTCGACAACATACAGTAGAGAGGTACTTAGTCTC
CATTATTATGTTATCAACAAAGGGTTCTATATGAGCCACTTCTTCTATTA
TAACATATTTCAGTAATTTCAACATACAATTCTATGAATATCTACAATCA
CAAAAAAGCCTTTCTTCCCCATAGCCTAAAAGGTTGTCTCACCAGAGCCT
CTCCATGTGGCCTTGTTATCTAGCTGACGTCTTCAATGTTTTCTCTCGTT
CACTGACACTCGGGTGTCTAAAGAGCTTATATGTTATAGCGTAGCGTCTC
AGTCCATTCTTCACTACATCAGAATTTCTAGAGAAAATAAGCAGAGTATA
CATACAACGTTGTGCATCGGTGTATCTATGATTTTAAATGAAATAAGATA
ATGGATTAGAATTAATGTGTAGAGAGTAACAGTTGACAGACAGATGCATC
CAGAAATTACAGCAGTGAACTGAATGCATTGGCTGTCTCATAAAGACAAT
GACATGATAGGTAACTGATAAAAGTTTGGCTCCTTCATTTTCTTTCCTCC
TTATTCTAGTCCTTGTACACTGCAGTGAAGGTTTGCTAAGCTCCTTGGTC
AAGGTAAAGCCTGATGGCTTTTAGTATACTAACTAAAAACATTCCCTGTC
TCTGGTAACCATTTTTCTGAGACAAAAGGGAGCTTTTATTACGCACCAGT
AGCCCTGAATACATGGGTTTN

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAGAACTTTTCAGCTGGGGAACGAGAG
TACCAGTGAGTACAGCTTTACGAGGTAAGTCTGGTCTTAAACTTTCTAAC
GAAATTCAAGACAGTCTATCAGAAGTAAAGTGGAAAATAGCTTTACAAGG
TACGCCTGGCCTTGAACTTTCTAACGAAATTCAAGACAGTCTATCAGAAG
TAAAGTGGAAAATGGCTTTGCAAGGTATGTTTGGCCTTGAATTTTTTCTA
GTGTTAGAAGCCCTTTTGTTCCTTTTCTCATGTTATCAAGTGGTTAAGGC
AGGGCGGATTCTGGATGAAATTCAGGGCAATCTATCAGAAGTAAAGCGGG
GAGAGAGAGTAGGAACAAAGAGAAAATATGGTACACAAAATAAGTATACA
GGCCTTTCCAAGGGTCTTGAACCCGAGGAAAAGTTTAGGTCAGGTAAGAA
TACCTGGGGAGAGATTAGAAGGAAGGAGAAGGAAAAAGAAAAGAACAAAG
ATCAATTATAGGAGCCAGTTCTTATTATTTCTGAATCAGATGAAAAGGTT
ATTAGGTCCTGGATAGGGCTCTTCCCGAATAGGTGATTGCACTTGTACAT
AATGATAGTAGCTAGTTTCTTGTATTCTGTCAGGGCTTATTGGCCCCCCT
TAAAGTTGTAAAATTACTATTTTTTCGGGATAATTTATGGATCTCTCGTT
TCTTTTTCCTCTCTCTCCCA

Query= MSMg01no468_d19.b1 MSMg01no468_d19.b1 CHROMAT_FILE:
MSMg01no468_d19.b1 PHD_FILE: MSMg01no468_d19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:44:23 2005
         (538 letters)



>mm_chr9_8995419_8996356
          Length = 938

 Score = 1009 bits (522), Expect = 0.0
 Identities = 534/538 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagtagagaggtacttagtctccattattatgttatcaacaaagggttctatatgagcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 cagtagagaggtacttagtctccattattatgttatcaacaaagggttctatatgagcca 679

                                                                       
Query: 61  cttcttctattataacatatttcagtaatttcaacatacaattctatgaatatctacaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 cttcttctattataacatatttcagtaatttcaacatacaattctatgaatatctacaat 619

                                                                       
Query: 121 cacaaaaaagcctttcttccccatagcctaaaaggttgtctcaccagagcctctccatgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 cacaaaaaagcctttcttccccatagcctaaaaggttgtctcaccagagcctctccatgt 559

                                                                       
Query: 181 ggccttgttatctagctgacgtcttcaatgttttctctcgttcactgacactcgggtgtc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 558 ggccttgttatctagctgacgtcttcaatgttttctctcgttcactgacactcaggtgtc 499

                                                                       
Query: 241 taaagagcttatatgttatagcgtagcgtctcagtccattcttcactacatcagaatttc 300
           ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 498 taaagagcttacatgttatagcctagcgtctcagtccattcttcactacatcagaatttc 439

                                                                       
Query: 301 tagagaaaataagcagagtatacatacaacgttgtgcatcggtgtatctatgattttaaa 360
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 438 tagagaaaataagcagagtatacatacaacgttgtgcatcgatgtatctatgattttaaa 379

                                                                       
Query: 361 tgaaataagataatggattagaattaatgtgtagagagtaacagttgacagacagatgca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tgaaataagataatggattagaattaatgtgtagagagtaacagttgacagacagatgca 319

                                                                       
Query: 421 tccagaaattacagcagtgaactgaatgcattggctgtctcataaagacaatgacatgat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tccagaaattacagcagtgaactgaatgcattggctgtctcataaagacaatgacatgat 259

                                                                     
Query: 481 aggtaactgataaaagtttggctccttcattttctttcctccttattctagtccttgt 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aggtaactgataaaagtttggctccttcattttctttcctccttattctagtccttgt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space:   489984
Effective search space used:   489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)