Query= MSMg01no468_p19.b1 MSMg01no468_p19.b1 CHROMAT_FILE:
MSMg01no468_p19.b1 PHD_FILE: MSMg01no468_p19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:24 2005
(600 letters)
>mm_chr9_34212442_34213442
Length = 1001
Score = 1027 bits (531), Expect = 0.0
Identities = 579/597 (96%), Gaps = 7/597 (1%)
Strand = Plus / Minus
Query: 5 gaattctcatttttttccaaa---atatttttgtgctgttgcctaaaggcattcaggtaa 61
||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 798 gaattctcatttttt--caaaagtatatttttgtgctgttgcctaaaggcattcaggtaa 741
Query: 62 tgggtgcatttttaataaatccaataagtaaataactgtattctctccctgggaaatccg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tgggtgcatttttaataaatccaataagtaaataactgtattctctccctgggaaatccg 681
Query: 122 gagggactcctatgctattgtactttgaaactgggatgcctggaatgagggtagggaatc 181
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 680 gagggactcctatgctattgtactttgaaactgggatgcctggaatgagggtagggcatc 621
Query: 182 ttcacacaccaagactttcaggttgattctactggctatcttcaggacaaaagaaacata 241
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttcacacaccaagac-ttcaggttgattctactggctatcttcaggacaaaagaaacata 562
Query: 242 gctgtcaccaaacacaggcatgagtcacctgcggaatactcagcactgggacttaccaat 301
||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 561 gctgtcagcaaacacaggcatgagtcacctgtggaatacacagcactgggacttaccaat 502
Query: 302 ccccagacacctttgagttcacacaccagcagccaaccccctctagtgttgatttaaata 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccccagacacctttgagttcacacaccagcagccaaccccctctagtgttgatttaaata 442
Query: 362 aatatttgccacaacagaacaggcgcacagccgtgggtagtaagtctctgagtgggttct 421
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 441 aatatttgccacaacagaacaggcgcacagccgtgggtagtaagtctctgaatgggttct 382
Query: 422 gtcccctgtccatcccctgtagcacaggggcagggggacccagagatctagtttctacgt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcccctgtccatcccctgtagcacaggggcagggggacccagagatctagtttctacgt 322
Query: 482 tccaaggtgccactatcatggctttgatcgtctgctgaaggttattctgtgctatttaag 541
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||
Sbjct: 321 tccaaggtgccactatcatggcgttgatcgtctgctgaaggttattctgcgctatttgag 262
Query: 542 gtgtttgtgtgtatcctgagactgcctgccc-tacccctgttcttccctccctgtaa 597
|||| |||||||||||||||||||||||||| || |||||||||||| |||||||||
Sbjct: 261 gtgtctgtgtgtatcctgagactgcctgcccctagccctgttcttccttccctgtaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1001
Length adjustment: 10
Effective length of query: 590
Effective length of database: 991
Effective search space: 584690
Effective search space used: 584690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no468_p19.g1 MSMg01no468_p19.g1 CHROMAT_FILE:
MSMg01no468_p19.g1 PHD_FILE: MSMg01no468_p19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:24 2005
(510 letters)
>mm_chr9_34036520_34037432
Length = 913
Score = 930 bits (481), Expect = 0.0
Identities = 504/513 (98%), Gaps = 3/513 (0%)
Strand = Plus / Plus
Query: 1 tatgtatttctaggagctgggttagaccaaaggaaacaatcttataatacagtaactatg 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 tatgtatttctaggagctgggttagaccaaaggaaacaatcttaaaatacagtaactatg 260
Query: 61 atttacagcactctcaaatagcttctaatttggagaagcacaaattagtctctacctgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttacagcactctcaaatagcttctaatttggagaagcacaaattagtctctacctgat 320
Query: 121 gacaggctctgggggaggggcaggaggatggctaggaacctctatggcctttgtcagcaa 180
||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 321 gacaggcactgggggaggggcaggaggatggctagaaacctccatggcctttgtcagcaa 380
Query: 181 cagaagttgggacatactaggccaggataacacctgtggagggccaaggagctgcagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagaagttgggacatactaggccaggataacacctgtggagggccaaggagctgcagaga 440
Query: 241 gatctaatttcttctaaatcctgcagaacagagatatatttacgctataaaagcgggtat 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatctaatcccttctaaatcctgcagaacagagatatatttacgctataaaagcgggtat 500
Query: 301 gtaaaaatccagacacatgccacatggggtagatttaatgagcttagcattctagttagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtaaaaatccagacacatgccacatggggtagatttaatgagcttagcattctagttagt 560
Query: 361 ttctttttttccctaaaagcaaagaa---gtttagggccacctggtgaataataattgct 417
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 561 ttctttttttccctaaaagcaaagaaaaagtttagggccacctggtgaataataattgct 620
Query: 418 ttatctccatccaggaacagatcaagttcaatactcataaatatcttttgtccaggaaga 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttatctccatccaggaacagatcaagttcaatactcataaatatcttttgtccaggaaga 680
Query: 478 ggtcacagtgaacagctaatgattctgagtcag 510
|||||||||||||||||||||||||||||||||
Sbjct: 681 ggtcacagtgaacagctaatgattctgagtcag 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 913
Length adjustment: 10
Effective length of query: 500
Effective length of database: 903
Effective search space: 451500
Effective search space used: 451500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
