Query= MSMg01no469_g15.b1 MSMg01no469_g15.b1 CHROMAT_FILE:
MSMg01no469_g15.b1 PHD_FILE: MSMg01no469_g15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:59 2005
(609 letters)
>mm_chr9_25808109_25809118
Length = 1010
Score = 1093 bits (565), Expect = 0.0
Identities = 598/609 (98%), Gaps = 1/609 (0%)
Strand = Plus / Plus
Query: 1 atagctttgctaatttt-ccctcttcctctattcatccaccctttcattttgagatatta 59
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 atagctttgctaatttttccctcttcctctattcatccatcctttcattttgagatatta 260
Query: 60 gaagatcacagtgctgtgtgagttcttgtatctacacagcatattcacagagatgctgta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagatcacagtgctgtgtgagttcttgtatctacacagcatattcacagagatgctgta 320
Query: 120 cagacttatgcataagtcttagtccttgatatcctattaattaagttgcccttgattatc 179
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 tagacttatgcataagtcttagtccttgctatcctattaattaagttgcccttgattatc 380
Query: 180 ataaaaattaactcaaacctactttttcacctctaaagcacataccagccttagacatag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataaaaattaactcaaacctactttttcacctctaaagcacataccagccttagacatag 440
Query: 240 cattacttgtttagatttactggattagcaactgtcaaggaaatacactatagcttctag 299
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cattacttgagaagatttactggattagcaactgtcaaggaaatacactatagcttctag 500
Query: 300 aaatagaaaaccaattgacacctgttaacataactgtgtggcatgcaccttgggggagtt 359
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 aaatagaaaaccaattgacaactgttaacataactgtggggcatgcaccttgggggagtt 560
Query: 360 cccagattcctgatattacaacaaagaaaacaaaattaagcacacgtgctgagagcaagt 419
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 561 cccagattcctgatattacaacaaagaaaacaaaattaagaacacgtgctgagagcaagt 620
Query: 420 gactcctgactttgtaagacctcctttaggagccaatctgcagtcaggtttcctgtttct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gactcctgactttgtaagacctcctttaggagccaatctgcagtcaggtttcctgtttct 680
Query: 480 caagctcaggcttgaatctaacgccttccttcagctgacacctcagtgacacatgacccg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caagctcaggcttgaatctaacgccttccttcagctgacacctcagtgacacatgacccg 740
Query: 540 ttcttcctttcttcaagcaattttgttgaattctgatgtaacattaccattaaatcatca 599
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 741 ttcttcctttcttcaagcaattttgttgaattcttatgtaacattaccattaaatcatca 800
Query: 600 gggttacca 608
|||||||||
Sbjct: 801 gggttacca 809
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1010
Length adjustment: 10
Effective length of query: 599
Effective length of database: 1000
Effective search space: 599000
Effective search space used: 599000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no469_g15.g1 MSMg01no469_g15.g1 CHROMAT_FILE:
MSMg01no469_g15.g1 PHD_FILE: MSMg01no469_g15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:45:59 2005
(582 letters)
>mm_chr9_25990630_25991611
Length = 982
Score = 1073 bits (555), Expect = 0.0
Identities = 576/583 (98%), Gaps = 2/583 (0%)
Strand = Plus / Minus
Query: 1 ttcttcatgatgcctttgtcacatagtctcaagtatttatttatgtgttgttcacctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ttcttcatgatgcctttgtcacatagtctcaagtatttatttatgtgttgttcacctcag 723
Query: 61 aatgtactaatttaagcacaattttctactagttttgaccattacatacattttaatttg 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 722 aatgtactaatttaagcgcaattttctactagttttgaccattacatacatttgaatttg 663
Query: 121 tctcctgtgtctcattgacaaattcccagagatgcttttctattctgtttatttttcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tctcctgtgtctcattgacaaattcccagagatgcttttctattctgtttatttttcatt 603
Query: 181 ttgatttttcagaaatgttttaacttacaatactactcaatattagaatcaattatcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ttgatttttcagaaatgttttaacttacaatactactcaatattagaatcaattatcttc 543
Query: 241 tcatttttagaatgatagctaaaaagcaaaacattagaaaaaggtgcaatcaatttttac 300
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tcatttggagaatgatagctaaaaagcaaaacattagaaaaaggtgcaatcaatttttac 483
Query: 301 atattgagtttactcttacacagtaaacttgtttagcattttcaatgtatatgtgctctg 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 atatttagtttactcttacacagtaaacttgtttagcattttcaatgtatatgtgctctg 423
Query: 361 tagttttctggtttctagtttcagttagcatgctgtctgtgaaaacaggaagattttctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tagttttctggtttctagtttcagttagcatgctgtctgtgaaaacaggaagattttctt 363
Query: 421 ttatttcatttggttgtcttttgcttaattatctctgctttttataagttaattctttaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttatttcatttggttgtcttttgcttaattatctctgctttttataagttaattctttaa 303
Query: 481 gaattttatgtaatctatttgatcatatttagttgcccttcccctactctccccaaatac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gaattttatgtaatctatttgatcatatttagttgcccttcccctactctccccaaatac 243
Query: 541 atgctttc-actacccacacaactttgtgtcctttatttctaa 582
|||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 242 atgc-ttctactacccacacaactttgtgtcctttatttctaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
