CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTCCAGGGTTCCAGTGGAGTGGAAGGGAGGTTAGGAGCCAACAAGGGA
GAGAGAGGCTATGAGGCTGGCAGAAGGAAGTGGGCAGCTGGGAAAGCCCA
CCTACAGGGGGCGTTATGGCCGTCTGTTCAAGCTGAGATAGAGAGATGGG
AGACAGTCCTCTCCAGCCTTCTTTGTCTGTATCCCTCTCCCCCCTTCCAT
GTTTTGCATCAGTGCTAGTTAGTGGCCATATAACTCACTGGACAAGAGGC
TGCCTTCTGGAGAATGCCATTCAAGGAGAATGTTCTGTGGCCCAATATCA
GAAGGAATTGTTTGTATTCCTATGTTCATGGTTCTGAAGTTTACCCTCTT
TTCAAACCAGTGAGACCAACCATTTTGATGAGCCCACAATGCTGTTTTCC
TTGGGGCTAAAACTGGGGCAGTGCCCACTAAAACACACCCTTTAGCTGCC
CTTTCTCCAGATCACACCATGACCTGGCTTCTGATTCAGTGAGGTGAAGC
AGGGGATGGATGGAGGTGAGCTGGACAAGAATCCTCAGACTGGAACAGCC
TGCCTTCTCATGCCCCAAAGGAACCAATAAGAGTGAGCTCCCAGTTTCAA
CCTTTGACTCCTTAGGAGAGCAAGGTTTAGAAGACCCGTGGCAGCTGAGG
AACAAGGTCCTGATCTCANGCAGCCTGGCATTTTATGCCTCCTTTCCTCC
TTCAACCACTTGCTCTAGCCTCG

AATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCAGTCTTGAAAGTGCCAGGAGTGGAA
TACCTCCCCATGAACTGTTGAGCAGGGGTGTTCCAGAGTTCTTCCTAACA
ATACAAGCTATTACGATTGCTCTTGATGATCCATCCAGAACTTGATGCTA
AGACTTATTGTTGAAGACAGCACACACGTTGGCCAGAAGACTTGGAGAAA
CATGCTGGTACTGACTGGGAATCTTTTTCCCTGCTGGCTAGATTTCAGAA
TACTGGACATTGCACAATAACAACCACCCTGGCAAGATATGCTCATGAAT
GTACTAGTAGTATATTTGGGGGCAACCATCTGCTTTTTGATTGAATTTAA
GGCCTATTATACACCTGGTGCTGTAAATCTGACCAAGAACCCGTAGTAGC
CTGTGAGTTCACAGTCCTGCTACTATTATTTTGCTAAATAATATCAAACT
GCCCTCTAAACACATATCTCTGTATCCTAGATTAGCACAGCCCCCAGTCT
TTGTGAGAGAAGTTCCTGTATGCTGTGGATGTTGGTTAATGGTAGAGACT
CAGAACTGGTAAAGTGTAGAGATGTCTATGGAGTAGAACATTTATATCAC
CCTCTCCCAGGGCTCAAGGAATACGCACACGAGAGAGACAGAAGAATGTT
AAGAGTCAGAGGCTGGGAGTGACCAGCATGAAACCCTGCAATCATGAATT
CACAGCAGATGGGGTTGTTTTCAGAAN

Query= MSMg01no471_n17.b1 MSMg01no471_n17.b1 CHROMAT_FILE:
MSMg01no471_n17.b1 PHD_FILE: MSMg01no471_n17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:16 2005
         (625 letters)



>mm_chr9_46777430_46778454
          Length = 1025

 Score = 1147 bits (593), Expect = 0.0
 Identities = 614/621 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctccagggttccagtggagtggaagggaggttaggagccaacaagggagagagag 64
           ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccagggctgcagtggagtggaagggaggttaggagccaacaagggagagagag 264

                                                                       
Query: 65  gctatgaggctggcagaaggaagtgggcagctgggaaagcccacctacagggggcgttat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 265 gctatgaggctggcagaaggaagtgggcagctgggaaagcccacctacagggggcgttac 324

                                                                       
Query: 125 ggccgtctgttcaagctgagatagagagatgggagacagtcctctccagccttctttgtc 184
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 325 ggccgtctgttcaagctgagatagagagatgggagatagtcctctccagccttctttgtc 384

                                                                       
Query: 185 tgtatccctctccccccttccatgttttgcatcagtgctagttagtggccatataactca 244
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 385 tgtatccctctccccccttccatgttttccatcagtgctagttagtggccatataactca 444

                                                                       
Query: 245 ctggacaagaggctgccttctggagaatgccattcaaggagaatgttctgtggcccaata 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctggacaagaggctgccttctggagaatgccattcaaggagaatgttctgtggcccaata 504

                                                                       
Query: 305 tcagaaggaattgtttgtattcctatgttcatggttctgaagtttaccctcttttcaaac 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcagaaggaattgtttgtattcctatgttcatggttctgaagtttaccctcttttcaaac 564

                                                                       
Query: 365 cagtgagaccaaccattttgatgagcccacaatgctgttttccttggggctaaaactggg 424
           ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 565 cagtgagaccaaccattttgatgagcccggaatgctgttttccttggggctaaaactggg 624

                                                                       
Query: 425 gcagtgcccactaaaacacaccctttagctgccctttctccagatcacaccatgacctgg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gcagtgcccactaaaacacaccctttagctgccctttctccagatcacaccatgacctgg 684

                                                                       
Query: 485 cttctgattcagtgaggtgaagcaggggatggatggaggtgagctggacaagaatcctca 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cttctgattcagtgaggtgaagcaggggatggatggaggtgagctggacaagaatcctca 744

                                                                       
Query: 545 gactggaacagcctgccttctcatgccccaaaggaaccaataagagtgagctcccagttt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gactggaacagcctgccttctcatgccccaaaggaaccaataagagtgagctcccagttt 804

                                
Query: 605 caacctttgactccttaggag 625
           |||||||||||||||||||||
Sbjct: 805 caacctttgactccttaggag 825


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space:   624225
Effective search space used:   624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)