Query= MSMg01no472_c15.b1 MSMg01no472_c15.b1 CHROMAT_FILE:
MSMg01no472_c15.b1 PHD_FILE: MSMg01no472_c15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:42 2005
(244 letters)
>mm_chr9_114507883_114508526
Length = 644
Score = 464 bits (240), Expect = e-135
Identities = 243/244 (99%)
Strand = Plus / Minus
Query: 1 cctctgccacccaagtgagcatgcagcaaccatcaccaccacccaaactgttgttgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cctctgccacccaagtgagcatgcagcaaccatcaccaccacccaaactgttgttgtttt 385
Query: 61 ttaactgtattacttgtttgtctatctgtggtatttgtacggatagtgattggggtggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttaactgtattacttgtttgtctatctgtggtatttgtacggatagtgattggggtggta 325
Query: 121 catatatgtcatggtatgcatgtggagatcagagaacagcttacaagacttagctctttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 catatatgtcatggtatgcatgtggagatcagagaacagcttacaagacttagctctttc 265
Query: 181 cagtacacgagttggattcaggaaataggcttgttgtaaagagttagccctcttgctggc 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cagcacacgagttggattcaggaaataggcttgttgtaaagagttagccctcttgctggc 205
Query: 241 taga 244
||||
Sbjct: 204 taga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no472_c15.g1 MSMg01no472_c15.g1 CHROMAT_FILE:
MSMg01no472_c15.g1 PHD_FILE: MSMg01no472_c15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:42 2005
(241 letters)
>mm_chr9_114344487_114345128
Length = 642
Score = 360 bits (186), Expect = e-104
Identities = 222/242 (91%), Gaps = 15/242 (6%)
Strand = Plus / Plus
Query: 1 attctgctgggcctgggagggcctgactgttcc-ggagcggagcaaccaggaagcggcaa 59
||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 201 attctgctgggcctgggagggcctgactgttcctggagcagagcagccaggaagcggcaa 260
Query: 60 ggttgcagttttgataagcagctctgctgagcctgctggcttgctgggagaagaggccgg 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 ggttgcagttttgataagcagctctgctgagcctgctggcttgctgggagaagaggccag 320
Query: 120 ggctgcctggacctctgtcaggcctgcattcacagctcttccctccaggttgctgcaaca 179
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 ggctgcctggacctctgtcaggcctgcattcgcagctcttccctccaggttgctgcaaca 380
Query: 180 agccttgtttgcaaaaacaaaaaaaaaacaaaacaaaacaaaaaaaaaaaggctctgctg 239
||||||||||||||||| |||||||||| ||||||| |||||||||||
Sbjct: 381 agccttgtttgcaaaaa-aaaaaaaaaa-------------aaaaaaagaggctctgctg 426
Query: 240 ga 241
||
Sbjct: 427 ga 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 642
Length adjustment: 9
Effective length of query: 232
Effective length of database: 633
Effective search space: 146856
Effective search space used: 146856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
