NNAATTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTCCCACTATTACTGTGTGAGGTGCAATTTGTGCTTTG
GGCTTTACTAAGGTTTCTTTAATGAATGTGGCTGCCTTTGCATTTGGAGC
ATAGATATTCAGAATTGATAGTTCCTCTTGGAAGATTTTTACCTTTGATG
AGTATGAAGTGCCCTTCCTTGTCTTCTTTGATAACTTTGGGTTGGAAGTC
GATTTTATTCGATATTGGAATGGCTACTCCAGCTTGTTTCTTCAGACCAT
TTGCTTGGAAAATTGTTTTCCAGCCTTTCACTCTGAGGTAGTGTCTGTCT
TTTTCCCTGAGATGGGTTTCCTGTAATCAGCAATATGTTGGGTCCTGTTT
GTGTAGCCAGTCTGTTAGTCTATGTCTTTTTATTGGGGAATTGAGTCCAT
TGATATTAAGAGATACTAAGGAAAAGTAATTGTTGCTTCCTATTATTTTT
GTTGTTAGAGTTGGCATTCTGTTCTTGTGGCTGTCTTCTTTTCGGTTTGT
TGAAGGATTACTTTCTTGCTTTTTCTAGGGTGTAGTTTCTGTCCTTGTAT
TGGTTTTTTTTTTCTGTTATTATCCTTTGAAGGGCTGGATTTGTGGAAAG
ATATGGTGTGAATTTGGTTTTGTCATGCAATACTTTGGATTCTCCCCCTA
TGTTAATTGAAAAGTTGGTTGTTATAAATAAC

ATATATTCAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCGTGTACTAACCTTTCTG
AAACACTCTGTCTGGGTGTTCTACCTCAGATTTATAAGAGTGGCAGACAG
CTCACACATGCCAGAAGCCCCAGCTTAACTGATTTCACAACACTGCTGAC
TTGCTTGGCTCCAGGATCTTCCTGTTGAGTTTCAGAATTCTGAAATTTAA
GATGCCATTGCTTAACATGTTGATAATTTTATTGCACCAGGAACTATGAC
CACACTGGTATGTGAAGTAGGGGGCAACCCTATAAACTGAGGGCTGTAGG
AATTTGTCCAAAAAAATAAAAAAATAAAAATAAAAAAGTGAGTCGCTGAG
AGCCTCATCGCTTTGAGTATTCATAAGAACACCATCATTTGAACGGTTAC
TTATATAAGGAGAAGAGATTTTCCTACCTAAAAAAAAGTATTCTTAAGGC
CTTGCATCCAGGACTCACAGATTCCCCTTAGTCCTGTAAAGGAGGCCCAG
AGACTCATCTAAGAGAGGGCAGAGATCAGTCAACCTATCCAAGACTCCAT
TGTTGTAGACCAAGTCCCAAGTCTGTTTCACAGTCCCTTGGATTACTTTT
GGAGTTGTCAGCTCCAATAAAATATATGAAATTGAGTATCTGCTCATGGG
CAGTTCCTGGAATTAAAGGGGGAGATTTAAAACCTCCCTGAAAGGG

Query= MSMg01no473_b23.g1 MSMg01no473_b23.g1 CHROMAT_FILE:
MSMg01no473_b23.g1 PHD_FILE: MSMg01no473_b23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:51:01 2005
         (469 letters)



>mm_chr9_41298053_41298921
          Length = 869

 Score =  899 bits (465), Expect = 0.0
 Identities = 468/469 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcgtgtactaacctttctgaaacactctgtctgggtgttctacctcagatttataagagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tcgtgtactaacctttctgaaacactctgtctgggtgttctacctcagatttataagagt 419

                                                                       
Query: 61  ggcagacagctcacacatgccagaagccccagcttaactgatttcacaacactgctgact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ggcagacagctcacacatgccagaagccccagcttaactgatttcacaacactgctgact 359

                                                                       
Query: 121 tgcttggctccaggatcttcctgttgagtttcagaattctgaaatttaagatgccattgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tgcttggctccaggatcttcctgttgagtttcagaattctgaaatttaagatgccattgc 299

                                                                       
Query: 181 ttaacatgttgataattttattgcaccaggaactatgaccacactggtatgtgaagtagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ttaacatgttgataattttattgcaccaggaactatgaccacactggtatgtgaagtagg 239

                                                                       
Query: 241 gggcaaccctataaactgagggctgtaggaatttgtccaaaaaaataaaaaaataaaaat 300
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gggcaaccctagaaactgagggctgtaggaatttgtccaaaaaaataaaaaaataaaaat 179

                                                                       
Query: 301 aaaaaagtgagtcgctgagagcctcatcgctttgagtattcataagaacaccatcatttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 aaaaaagtgagtcgctgagagcctcatcgctttgagtattcataagaacaccatcatttg 119

                                                                       
Query: 361 aacggttacttatataaggagaagagattttcctacctaaaaaaaagtattcttaaggcc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 aacggttacttatataaggagaagagattttcctacctaaaaaaaagtattcttaaggcc 59

                                                            
Query: 421 ttgcatccaggactcacagattccccttagtcctgtaaaggaggcccag 469
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58  ttgcatccaggactcacagattccccttagtcctgtaaaggaggcccag 10


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space:   394281
Effective search space used:   394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)