XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGCGGAATTC
CAGCCCAATTTACCTTTGCTGTGAAGGCTAACACAGAAGCAATATTCCTT
TCATATATAGATATTTTATGTTAAGTAACAATGGACCATGCTTAAGGCAT
AAACCTTGGATAGGGCTTTCCAAGAAGTATCCTGGGTAGCCTCAAACAAA
ACTGTTAACACTATGTACAGTACAGATACCCTACTTTCTGGCATCCATGT
GATCTAGACTCTAATCTTAGAAACTGCAAACCTGCCAAATGTCGCCTAAG
AACCATCCAGTGAGCTCTCTTATTGTTCCTAGAATTCCTCTAAGACAGTG
GCTTCAAAGCCACCCAAACTATACACGGGGCCGTGAAGTGTGACACTCCC
TTAGGGAAGTCTACACCTACTCTCTGAGTGGTGTCTTTCTTTCTGAGCAG
NTTTCTTTTAACCTTCCAGTTTCATCTTTATTGCCCATTAATTCTACTTT
ACACTGGCTAGCCCAGAAACATGCTCCGTTTTCTTCCAGCCAGAANACCC
AGTTCTGCTCTGAACATCTCATATCTGATGACAATTCACGCTTGTTGACT
TATAATTTTTTTATCTTTTCTCTTGCCTTTGCATTTCTTTTTTTTATCCT
CCTTATCTTCCCTATCTTTCTCTTTCCTTCCTTTTTCCCTTCCCTTTCCC
TATCTTTTTTTTCCCTTCCCCTTTTCCTTTTCTCTTTTTTCCCCCATCCC
ACCCCTTTTCTTCTCTTCCCCTTCCCTTTATCACACCCCTCTT

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXTTCCGAAATACACTCTGTATACCAAACTGGCATCGAACTCACA
GAGATCTGCCTACCTCTGCCTCCTAAGTGCTGAAATTAAAGGCATGCACC
ACCACCGGCTGGCTCAGGATCCTACATCTTATCTCCTCAAATGCCTTCTA
ATTCAGACATAGGTCCAGACAACCATTAATCTCTTCCTAATAGTATCTTA
CTATTGGTGTGCATGGTGGATGAGAAGCAGCAGGGTGGGATTCGGCTTCC
TGATTAGCATCTGTCTTAGTTAGGTTTTCTATTGCTATGACCAAAAAGCA
AGCTGTTTTTTAAAGCCCCCATTCCGCTTATACCTCCAAATTGCTGTTCA
TCATCACCAGAACCCCCGACAGGAATTCTTATAGGGAATGAACCTGTAGG
CTGGATCTGATGATTCATCCTTGCTACCCCTGCTCTCCTGCCTCTCTTGC
CTTGACTCTCATGGTCTGGTCATCCCTCGCCCCCATATTGTTTTATGACC
TCTACCCCTTCCCTGGTATCCCCCCATTCTCATTTCGTATTCATCCCTGC
GTCCACTCAATTTTATATACCTCCGTTCTATCCTCTTCCCCCTCTTCACT
TCTTTTCCCCCCACATATCTCTTTTTCTTTTTTCTTTCCCTCGCGTTCCC
CCACCCCTACCACCCTCCTCCCCCCTTTTTCCCCCCCCCTCCACCCCTTT
TCCTTATATTTTTTTTCTTCCCCACTCCTCTCCTCCTCCCCCCACTACTT
CCCTGTTCTGCTCATATN

Query= MSMg01no476_g23.b1 MSMg01no476_g23.b1 CHROMAT_FILE:
MSMg01no476_g23.b1 PHD_FILE: MSMg01no476_g23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:32 2005
         (419 letters)



>mm_chr9_86667512_86668330
          Length = 819

 Score =  789 bits (408), Expect = 0.0
 Identities = 416/419 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgctgtgaaggctaacacagaagcaatattcctttcatatatagatattttatgttaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgctgtgaaggctaacacagaagcaatattcctttcatatatagatattttatgttaag 260

                                                                       
Query: 61  taacaatggaccatgcttaaggcataaaccttggatagggctttccaagaagtatcctgg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taacaatggaccatgcttaaggcataaaccttggatagggctttccaagaagtatcctgg 320

                                                                       
Query: 121 gtagcctcaaacaaaactgttaacactatgtacagtacagataccctactttctggcatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtagcctcaaacaaaactgttaacactatgtacagtacagataccctactttctggcatc 380

                                                                       
Query: 181 catgtgatctagactctaatcttagaaactgcaaacctgccaaatgtcgcctaagaacca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catgtgatctagactctaatcttagaaactgcaaacctgccaaatgtcgcctaagaacca 440

                                                                       
Query: 241 tccagtgagctctcttattgttcctagaattcctctaagacagtggcttcaaagccaccc 300
           ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccagtgagctctcttaatgctcctagaattcctctaagacagtggcttcaaagccaccc 500

                                                                       
Query: 301 aaactatacacggggccgtgaagtgtgacactcccttagggaagtctacacctactctct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaactatacacggggccgtgaagtgtgacactcccttagggaagtctacacctactctct 560

                                                                      
Query: 361 gagtggtgtctttctttctgagcagntttcttttaaccttccagtttcatctttattgc 419
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 gagtggtgtctttctttctgagcagttttcttttaaccttccagtttcatctttattgc 619


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space:   332100
Effective search space used:   332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no476_g23.g1 MSMg01no476_g23.g1 CHROMAT_FILE:
MSMg01no476_g23.g1 PHD_FILE: MSMg01no476_g23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:33 2005
         (246 letters)



>mm_chr9_86828506_86829151
          Length = 646

 Score =  460 bits (238), Expect = e-134
 Identities = 244/246 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctgtataccaaactggcatcgaactcacagagatctgcctacctctgcctcctaagtgc 60
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tctgtatactaaactggcatcgaactcacagagatctgcctacctctgcctcctaagtgc 481

                                                                       
Query: 61  tgaaattaaaggcatgcaccaccaccggctggctcaggatcctacatcttatctcctcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tgaaattaaaggcatgcaccaccaccggctggctcaggatcctacatcttatctcctcaa 421

                                                                       
Query: 121 atgccttctaattcagacataggtccagacaaccattaatctcttcctaatagtatctta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 420 atgccttctaattcagacataggtccagacaaccattaatctcttcctaatagcatctta 361

                                                                       
Query: 181 ctattggtgtgcatggtggatgagaagcagcagggtgggattcggcttcctgattagcat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ctattggtgtgcatggtggatgagaagcagcagggtgggattcggcttcctgattagcat 301

                 
Query: 241 ctgtct 246
           ||||||
Sbjct: 300 ctgtct 295


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space:   150969
Effective search space used:   150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)