Query= MSMg01no476_h01.b1 MSMg01no476_h01.b1 CHROMAT_FILE:
MSMg01no476_h01.b1 PHD_FILE: MSMg01no476_h01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:33 2005
(471 letters)
>mm_chr9_43368061_43368931
Length = 871
Score = 843 bits (436), Expect = 0.0
Identities = 439/440 (99%)
Strand = Plus / Minus
Query: 32 gagttcaaggccaccttaggctatagagaaaacctgtgattcaaacaatctaaacaacta 91
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 gagttcaaggccgccttaggctatagagaaaacctgtgattcaaacaatctaaacaacta 812
Query: 92 aattaaacaaacaaatggcagctgggtatggggtccatgcctgcaagcccagcacccagg 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 aattaaacaaacaaatggcagctgggtatggggtccatgcctgcaagcccagcacccagg 752
Query: 152 aagcagaggcaggaggattgcataagttcaaggtcaacctggtctacatagtgtgagcct 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 aagcagaggcaggaggattgcataagttcaaggtcaacctggtctacatagtgtgagcct 692
Query: 212 ctccctccaaaccaaacaaacaactctctctgtccaacagaaattccagaacacttgtcc 271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ctccctccaaaccaaacaaacaactctctctgtccaacagaaattccagaacacttgtcc 632
Query: 272 tagacaggcctcgggaggttgagcttgggaactgaggagtcagcatcctagacaaatttt 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tagacaggcctcgggaggttgagcttgggaactgaggagtcagcatcctagacaaatttt 572
Query: 332 ccggatcattcctgtatttgcagaggtcagagagtcactagatagtccttccgtaggctc 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ccggatcattcctgtatttgcagaggtcagagagtcactagatagtccttccgtaggctc 512
Query: 392 tgtgctcagcatgtgacttgcatttcagggagatgggtgactattctcccagggtggaaa 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tgtgctcagcatgtgacttgcatttcagggagatgggtgactattctcccagggtggaaa 452
Query: 452 aggatgatattgacagttcc 471
||||||||||||||||||||
Sbjct: 451 aggatgatattgacagttcc 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no476_h01.g1 MSMg01no476_h01.g1 CHROMAT_FILE:
MSMg01no476_h01.g1 PHD_FILE: MSMg01no476_h01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:33 2005
(240 letters)
>mm_chr9_43232010_43232655
Length = 646
Score = 433 bits (224), Expect = e-126
Identities = 238/246 (96%), Gaps = 6/246 (2%)
Strand = Plus / Plus
Query: 1 gtgtggctttggataagccattgggcttctctgggcctccacaaaattgcaacaaacagg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtgtggctttggataagccattgggcttctctgggcctccacaaaattgcaacaaacaga 260
Query: 61 gggttgtcatgaggcttcataagatggtgtgagaaactgtgaggactcagactcttgaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggttgtcatgaggcttcataagatggtgtgagaaactgtgaggactcagactcttgaca 320
Query: 121 gtggcccaaacgttattggagatatgactttgaagtacttgtggactttttacttaaggt 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 gtggcccaaacgttattggagatatgactttgaagtacttgtggactttttaattaaggt 380
Query: 181 cagaattatttattattaacattgtgtgtgtgtgtgtgt------tcgtgtgcaagtgcg 234
||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 cagaattatttattattaacattgtgtgtgtgtgtgtgtgtgtgttcgtgtgcaagtgcg 440
Query: 235 catata 240
||||||
Sbjct: 441 catata 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 646
Length adjustment: 9
Effective length of query: 231
Effective length of database: 637
Effective search space: 147147
Effective search space used: 147147
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
